RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 GDF9O60383 454 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 HSF2BPO75031 334 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 RNF40O75150 1001 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 GRAP2O75791 330 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 GJB6O95452 261 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 ABL1P00519 1130 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 LTFP02788 710 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 CKMP06732 381 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 SCNN1AP37088 669 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 PSEN1P49768 467 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 GALK1P51570 392 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 SHC2P98077 582 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 STPG1Q5TH74 334 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 TXNDC8Q6A555 127 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 SLC26A9Q7LBE3 791 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 BHLHA9Q7RTU4 235 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 OSCP1Q8WVF1 389 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 CD101Q93033 1021 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 ARHGEF26Q96DR7 871 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 MCEEQ96PE7 176 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 SMG9Q9H0W8 520 aaKnown RBP12.58□□□□□ -0.4
HDAC7-226ENST00000547259 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 MRPL47Q9HD33 250 aaKnown RBP12.58□□□□□ -0.4
HDAC7-226ENST00000547259 ASNSD1Q9NWL6 643 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-226ENST00000547259 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 GON4LQ3T8J9 2241 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 CAPN9O14815 690 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 TM4SF5O14894 197 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 TADA3O75528 432 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 DAB1O75553 588 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 CYP1A2P05177 515 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 GLI1P08151 1106 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 RALAP11233 206 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 KRT3P12035 628 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 TCF3P15923 654 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 KCNA4P22459 653 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 GJA4P35212 333 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 MPLP40238 635 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 PPP3CCP48454 512 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 RNASE9P60153 205 aaKnown RBP12.57□□□□□ -0.4
HDAC7-226ENST00000547259 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
HDAC7-226ENST00000547259 KIF5AQ12840 1032 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 SF3A2Q15428 464 aaKnown RBP12.57□□□□□ -0.4
HDAC7-226ENST00000547259 PLK5Q496M5 336 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 USP39Q53GS9 565 aaKnown RBP12.57□□□□□ -0.4
HDAC7-226ENST00000547259 DAB2IPQ5VWQ8 1189 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 DCUN1D2Q6PH85 259 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 SCD5Q86SK9 330 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 ABCA7Q8IZY2 2146 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 EDEM1Q92611 657 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 POPDC2Q9HBU9 364 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 PPP2R2CQ9Y2T4 447 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
HDAC7-226ENST00000547259 PI4KAP42356 2102 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 TCRBV5S1A1TA0A578 114 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RCCD1A6NED2 376 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 SIGLEC16A6NMB1 481 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-226ENST00000547259 KRT37O76014 449 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 NFATC1O95644 943 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 EGFP01133 1207 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 NCAM1P13591 858 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RARGP13631 454 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 HDCP19113 662 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 MAMLD1Q13495 774 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 DMC1Q14565 340 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 TAF5Q15542 800 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RNF43Q68DV7 783 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 EMC1Q8N766 993 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 JOSD2Q8TAC2 188 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 ZNF564Q8TBZ8 553 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 RFFLQ8WZ73 363 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 NACA2Q9H009 215 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
HDAC7-226ENST00000547259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC7-226ENST00000547259 UVRAGQ9P2Y5 699 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms