RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RBM12BQ8IXT5 1001 aaKnown RBP13.11□□□□□ -0.31
PTCH1-212ENST00000546744 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 PRKCBP05771 671 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
PTCH1-212ENST00000546744 ANGPT1Q15389 498 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 TDRPQ86YL5 185 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 PRELID2Q8N945 189 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 FLCNQ8NFG4 579 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 IL1RL2Q9HB29 575 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 MAP3K20Q9NYL2 800 aaKnown RBP13.11□□□□□ -0.31
PTCH1-212ENST00000546744 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 FAM20BO75063 409 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 F9P00740 461 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 SHBGP04278 402 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 VDRP11473 427 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 ZC2HC1CQ53FD0 456 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-212ENST00000546744 PRR23CQ6ZRP0 262 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 STRA8Q7Z7C7 330 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 BHLHE22Q8NFJ8 381 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-212ENST00000546744 OTULINQ96BN8 352 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 SELENONQ9NZV5 590 aa13.11□□□□□ -0.31
PTCH1-212ENST00000546744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ALOX15BO15296 676 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 INPP4BO15327 924 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 NBNO60934 754 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 NPY2RP49146 381 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 PRKG1Q13976 671 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 TTLL9Q3SXZ7 439 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 OTOAQ7RTW8 1153 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 FAM45AQ8TCE6 357 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 C7orf26Q96N11 449 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CYP3A43Q9HB55 503 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 POLD1P28340 1107 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CCT3P49368 545 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 UBE3AQ05086 875 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SF3B3Q15393 1217 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 TSNQ15631 228 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 PKN1Q16512 942 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CYP4A22Q5TCH4 519 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 JPH1Q9HDC5 661 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CD274Q9NZQ7 290 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 LNPEPQ9UIQ6 1025 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ETS1P14921 441 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 BMP6P22004 513 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 RAD51Q06609 339 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SQLEQ14534 574 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CYP51A1Q16850 503 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 TYSND1Q2T9J0 566 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 STK32CQ86UX6 486 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 MIER2Q8N344 545 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 POC5Q8NA72 575 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ATG16L2Q8NAA4 619 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 HOXC10Q9NYD6 342 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
PTCH1-212ENST00000546744 ASTN2O75129 1339 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-212ENST00000546744 NR5A2O00482 541 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 HDAC3O15379 428 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SLC18A1P54219 525 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 NME5P56597 212 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 USP46P62068 366 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 FAAP100Q0VG06 881 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 NFIXQ14938 502 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 PROX1Q92786 737 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SGF29Q96ES7 293 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 CD4P01730 458 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 ITGAVP06756 1048 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 PTPN7P35236 360 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms