RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PIK3R6Q5UE93 754 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 CWF19L1Q69YN2 538 aaKnown RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 RFWD3Q6PCD5 774 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 C12orf40Q86WS4 652 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 FAM131BQ86XD5 332 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 ETFBKMTQ8IXQ9 262 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 CTNNBL1Q8WYA6 563 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 PBXIP1Q96AQ6 731 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 PRMT1Q99873 361 aaKnown RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 NUP85Q9BW27 656 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 IRX2Q9BZI1 471 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 FOXQ1Q9C009 403 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 WDFY4Q6ZS81 3184 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 TSPAN3O60637 253 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 PSMA2P25787 234 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 CYLC1P35663 651 aaPredicted RBP21.22■□□□□ 0.99
HMGA2-211ENST00000545998 EIF2DP41214 584 aaKnown RBP21.22■□□□□ 0.99
HMGA2-211ENST00000545998 PON2Q15165 354 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 MS4A13Q5J8X5 152 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 C10orf76Q5T2E6 689 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 FLCNQ8NFG4 579 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 BHMTQ93088 406 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 LTB4R2Q9NPC1 389 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 PLK2Q9NYY3 685 aa21.22■□□□□ 0.99
HMGA2-211ENST00000545998 MRPS17Q9Y2R5 130 aaKnown RBP21.22■□□□□ 0.99
HMGA2-211ENST00000545998 MTF2Q9Y483 593 aaPredicted RBP21.22■□□□□ 0.99
HMGA2-211ENST00000545998 STK25O00506 426 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 CACNG3O60359 315 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 PAGE1O75459 146 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 CYBBP04839 570 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 TACR2P21452 398 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 SLC6A11P48066 632 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 GALK1P51570 392 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 SGSHP51688 502 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 MPPE1Q53F39 396 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 TMEM196Q5HYL7 178 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 RAP1GAP2Q684P5 730 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 RAD9BQ6WBX8 426 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 NAT16Q8N8M0 369 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 PJA1Q8NG27 643 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 MYEOVQ96EZ4 313 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 PRICKLE1Q96MT3 831 aaPredicted RBP21.21■□□□□ 0.99
HMGA2-211ENST00000545998 P2RY13Q9BPV8 354 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 C1QTNF1Q9BXJ1 281 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 FBRSL1Q9HCM7 1045 aaKnown RBP21.21■□□□□ 0.99
HMGA2-211ENST00000545998 TMPRSS4Q9NRS4 437 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 INTUQ9ULD6 942 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 HS3ST4Q9Y661 456 aa21.21■□□□□ 0.99
HMGA2-211ENST00000545998 EPN1Q9Y6I3 576 aaPredicted RBP21.21■□□□□ 0.99
HMGA2-211ENST00000545998 EIF3CLB5ME19 914 aaKnown RBP21.2■□□□□ 0.98
HMGA2-211ENST00000545998 NDUFA10O95299 355 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 DESP17661 470 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 TARSP26639 723 aaKnown RBP21.2■□□□□ 0.98
HMGA2-211ENST00000545998 UBXN2BQ14CS0 331 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 CHSY1Q86X52 802 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 DDI1Q8WTU0 396 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 CD101Q93033 1021 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 TMA16Q96EY4 203 aaKnown RBP21.2■□□□□ 0.98
HMGA2-211ENST00000545998 NELL2Q99435 816 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 EIF3CQ99613 913 aaKnown RBP21.2■□□□□ 0.98
HMGA2-211ENST00000545998 OSBPL6Q9BZF3 934 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 UVRAGQ9P2Y5 699 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 FBXO10Q9UK96 956 aa21.2■□□□□ 0.98
HMGA2-211ENST00000545998 NDRG2Q9UN36 371 aaKnown RBP21.2■□□□□ 0.98
HMGA2-211ENST00000545998 FAM170BA6NMN3 283 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 TULP3O75386 442 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 HOXD9P28356 352 aaPredicted RBP21.19■□□□□ 0.98
HMGA2-211ENST00000545998 FZD5Q13467 585 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 MPP7Q5T2T1 576 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 RNF43Q68DV7 783 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 ARFGAP1Q8N6T3 406 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 ZNF564Q8TBZ8 553 aaPredicted RBP21.19■□□□□ 0.98
HMGA2-211ENST00000545998 EXOC4Q96A65 974 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 C1orf74Q96LT6 269 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 XPO6Q96QU8 1125 aaKnown RBP21.19■□□□□ 0.98
HMGA2-211ENST00000545998 HAPLN3Q96S86 360 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 ANAPC7Q9UJX3 599 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 ATG2BQ96BY7 2078 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 DOCK4Q8N1I0 1966 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 PRR33A8MZF0 331 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 F5H5T6 163 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 ADRA1BP35368 520 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 MAGEA1P43355 309 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 MESP2Q0VG99 397 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 AUHQ13825 339 aaKnown RBP21.19■□□□□ 0.98
HMGA2-211ENST00000545998 GSE1Q14687 1217 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 SPA17Q15506 151 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 FSTL4Q6MZW2 842 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 CCDC105Q8IYK2 499 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 LGI2Q8N0V4 545 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 PHTF2Q8N3S3 785 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 FBXL6Q8N531 539 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 CCDC185Q8N715 623 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 HJURPQ8NCD3 748 aaPredicted RBP21.19■□□□□ 0.98
HMGA2-211ENST00000545998 BTBD6Q96KE9 485 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 CTTNBP2NLQ9P2B4 639 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 SIT1Q9Y3P8 196 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 PCDHA13Q9Y5I0 950 aa21.19■□□□□ 0.98
HMGA2-211ENST00000545998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.18■□□□□ 0.98
HMGA2-211ENST00000545998 AOC1P19801 751 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms