RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 DNAAF5Q86Y56 855 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 NAV1Q8NEY1 1877 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 FAM162AQ96A26 154 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 VCPIP1Q96JH7 1222 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 WHRNQ9P202 907 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 DCDC2Q9UHG0 476 aa9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 PAIP2BQ9ULR5 123 aaKnown RBP9.27□□□□□ -0.92
MTHFD1-202ENST00000545908 OR1D2P34982 312 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 MCL1Q07820 350 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 POU6F1Q14863 301 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 STRA8Q7Z7C7 330 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 HJURPQ8NCD3 748 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 PIP4K2CQ8TBX8 421 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 SEZ6LQ9BYH1 1024 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 PLAGL2Q9UPG8 496 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 CALCAP01258 141 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ENO1P06733 434 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ST3GAL1Q11201 340 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ISCUQ9H1K1 167 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 EIF3LQ9Y262 564 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 NEDD8-MDP1E9PL57 170 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 SYN1P17600 705 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 CHKAP35790 457 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 TARBP2Q15633 366 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 CHI3L2Q15782 390 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 FIGNQ5HY92 759 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 NAT16Q8N8M0 369 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 PRPF18Q99633 342 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 CARD9Q9H257 536 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 YY1AP1Q9H869 796 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 SEPT3Q9UH03 358 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 TRHDEQ9UKU6 1024 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 CHD4Q14839 1912 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 PSMD12O00232 456 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 RPN2P04844 631 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 APODP05090 189 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 SNHG28P0DPA3 235 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ITGA9Q13797 1035 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 E2F4Q16254 413 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 ECM1Q16610 540 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 GRAMD1BQ3KR37 738 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 IRAK1BP1Q5VVH5 260 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 BBS2Q9BXC9 721 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 GPSM3Q9Y4H4 160 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
MTHFD1-202ENST00000545908 PDZK1P1A8MUH7 402 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ZSCAN9O15535 394 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 KRT16P08779 473 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 SPATA31C1P0DKV0 1188 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CHN1P15882 459 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 THOP1P52888 689 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 DUSP4Q13115 394 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ACAP1Q15027 740 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 RARS2Q5T160 578 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 PSRC1Q6PGN9 363 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 SERPINA13PQ6UXR4 307 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ARMCX6Q7L4S7 300 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 FAR2Q96K12 515 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 RIPOR3Q96MK2 946 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 GYS2P54840 703 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 TUSC3Q13454 348 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 MTSS1LQ765P7 747 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 WNT8BQ93098 351 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ZYG11BQ9C0D3 744 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 RAD18Q9NS91 495 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 COL1A1P02452 1464 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 O00370 1275 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 TIMM44O43615 452 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 TSPAN1O60635 241 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 GJB6O95452 261 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 NT5DC1Q5TFE4 455 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CDKAL1Q5VV42 579 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 HTR3CQ8WXA8 447 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 LENG9Q96B70 501 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 POLR1EQ9GZS1 481 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 RNF186Q9NXI6 227 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ALS2Q96Q42 1657 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ARL5CA6NH57 179 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF839A8K0R7 811 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ONECUT3O60422 494 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CDH16O75309 829 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 MLNP12872 115 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 SARSP49591 514 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF135P52742 658 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 KCNK10P57789 538 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CNTN1Q12860 1018 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 DDX39BQ13838 428 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 C2orf49Q9BVC5 232 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CHCHD3Q9NX63 227 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 CTNNAL1Q9UBT7 734 aa9.26□□□□□ -0.93
MTHFD1-202ENST00000545908 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms