RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 SLC26A7Q8TE54 656 aa15.5■□□□□ 0.07
USP28-214ENST00000545540 MTBPQ96DY7 904 aa15.5■□□□□ 0.07
USP28-214ENST00000545540 XPNPEP3Q9NQH7 507 aa15.5■□□□□ 0.07
USP28-214ENST00000545540 TIMM13Q9Y5L4 95 aaPredicted RBP15.5■□□□□ 0.07
USP28-214ENST00000545540 DNAJC6O75061 913 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 PSEN1P49768 467 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 POLE2P56282 527 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 STILQ15468 1287 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 DEFB106AQ8N104 65 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 PHTF2Q8N3S3 785 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 OR52K1Q8NGK4 314 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 SIRPGQ9P1W8 387 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 DGKIO75912 1065 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 LUC7L3O95232 432 aaKnown RBP15.49■□□□□ 0.07
USP28-214ENST00000545540 GSRP00390 522 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 SLC1A6P48664 564 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 IRF9Q00978 393 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 TTLL4Q14679 1199 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 NCBP2-AS2Q69YL0 99 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 IL31Q6EBC2 164 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 HFE2Q6ZVN8 426 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 PID1Q7Z2X4 250 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 MAVSQ7Z434 540 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 HTR3CQ8WXA8 447 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 ZNF408Q9H9D4 720 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 RGS17Q9UGC6 210 aaPredicted RBP15.49■□□□□ 0.07
USP28-214ENST00000545540 FAM72CH0Y354 149 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 RNF103O00237 685 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 SP100P23497 879 aaPredicted RBP15.49■□□□□ 0.07
USP28-214ENST00000545540 TYK2P29597 1187 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 PDK2Q15119 407 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 FAM72AQ5TYM5 149 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 FAM72DQ6L9T8 149 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 FAM72BQ86X60 149 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 P2RY11Q96G91 374 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 RPS6KL1Q9Y6S9 549 aa15.49■□□□□ 0.07
USP28-214ENST00000545540 DCXO43602 365 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 MCF2P10911 925 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TKTP29401 623 aaKnown RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 ADIGQ0VDE8 80 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 RAPH1Q70E73 1250 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 FRMD8P1Q9BZ68 369 aaPredicted RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 WWP1Q9H0M0 922 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 KCNK4Q9NYG8 393 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 DOCK1Q14185 1865 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 BCLAF3A2AJT9 711 aaKnown RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 H3BRB1 525 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 MAP3K7O43318 606 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TGDSO95455 350 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 GLRBP48167 497 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 ARHGAP1Q07960 439 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 PRAMEF19Q5SWL8 479 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 CATSPER4Q7RTX7 472 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TMPRSS6Q8IU80 811 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 MARK4Q96L34 752 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 FCRL3Q96P31 734 aaPredicted RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 PRDM12Q9H4Q4 367 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TUT1Q9H6E5 874 aaKnown RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TAGLN3Q9UI15 199 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 AK5Q9Y6K8 562 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 FAM159BA6NKW6 160 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 ANPEPP15144 967 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TGM2P21980 687 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 SULT1E1P49888 294 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TEDDM1Q5T9Z0 273 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 HPS6Q86YV9 775 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 PPFIBP2Q8ND30 876 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 TFB1MQ8WVM0 346 aaKnown RBP15.48■□□□□ 0.07
USP28-214ENST00000545540 TEKT4Q8WW24 435 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 CCDC106Q9BWC9 280 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 ASB7Q9H672 318 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
USP28-214ENST00000545540 SMAPO00193 183 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 NDC80O14777 642 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
USP28-214ENST00000545540 AVPR1AP37288 418 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 PACS1Q6VY07 963 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 MFSD3Q96ES6 412 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 TXNDC16Q9P2K2 825 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 FGF3P11487 239 aaPredicted RBP15.47■□□□□ 0.07
USP28-214ENST00000545540 GNAT1P11488 350 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 CACNA2D1P54289 1103 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 ACAP1Q15027 740 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 HSP90AA5PQ58FG0 334 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 FOXB2Q5VYV0 432 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 RASSF3Q86WH2 238 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 DNAAF3Q8N9W5 541 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 USP33Q8TEY7 942 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 FAM136AQ96C01 138 aa15.47■□□□□ 0.07
USP28-214ENST00000545540 WDR55Q9H6Y2 383 aaPredicted RBP15.47■□□□□ 0.07
USP28-214ENST00000545540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.46■□□□□ 0.07
USP28-214ENST00000545540 CIB2O75838 187 aa15.46■□□□□ 0.07
USP28-214ENST00000545540 ITGA2BP08514 1039 aa15.46■□□□□ 0.07
USP28-214ENST00000545540 GNL1P36915 607 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms