RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GRIN1Q05586 938 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 DUSP7Q16829 419 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 TIGD2Q4W5G0 525 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 GARNL3Q5VVW2 1013 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 AFMIDQ63HM1 303 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 PYHIN1Q6K0P9 492 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 RBM43Q6ZSC3 357 aaKnown RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 GLRX5Q86SX6 157 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 TLK2Q86UE8 772 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 NUDCD3Q8IVD9 361 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 ADSSL1Q8N142 457 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 FBXL6Q8N531 539 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 LRRN4CLQ8ND94 238 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 OR5T1Q8NG75 326 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 MOSPD2Q8NHP6 518 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 SYTL5Q8TDW5 730 aaPredicted RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 GTF3C2Q8WUA4 911 aaPredicted RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 CHAC2Q8WUX2 184 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 DDX17Q92841 729 aaKnown RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 KLHL29Q96CT2 875 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 PDXPQ96GD0 296 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 AK8Q96MA6 479 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 TMEM237Q96Q45 408 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 CAMKK2Q96RR4 588 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 AGAP2Q99490 1192 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 MENTQ9BUN1 341 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 NOC4LQ9BVI4 516 aaKnown RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 DDX47Q9H0S4 455 aaKnown RBP5.28□□□□□ -1.56
UBE4A-203ENST00000545354 MLXIPLQ9NP71 852 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 UCKL1Q9NWZ5 548 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 TOR4AQ9NXH8 423 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 MTMR4Q9NYA4 1195 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 ADAM22Q9P0K1 906 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 SEPT3Q9UH03 358 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 TINAGQ9UJW2 476 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 STOML2Q9UJZ1 356 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 PCDHGC3Q9UN70 934 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 PCDHGB7Q9Y5F8 929 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 SHANK2Q9UPX8 1470 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 BCL9O00512 1426 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 RIMS2Q9UQ26 1411 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 PITPNM2Q9BZ72 1349 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 C3P01024 1663 aa5.28□□□□□ -1.56
UBE4A-203ENST00000545354 SAMD9Q5K651 1589 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ABCC12Q96J65 1359 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ZNF233A6NK53 670 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PGRMC1O00264 195 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 O00370 1275 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 CLOCKO15516 846 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 AP1G1O43747 822 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 TRIM3O75382 744 aaPredicted RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 MED24O75448 989 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 TRMUO75648 421 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PPM1BO75688 479 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 IDH1O75874 414 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 RASAL1O95294 804 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PTBP3O95758 552 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ADH1CP00326 375 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 GALTP07902 379 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 SNRPA1P09661 255 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 RALAP11233 206 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ITGALP20701 1170 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 MAP4P27816 1152 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 HOXC8P31273 242 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 L1CAMP32004 1257 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 SPAM1P38567 509 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 NPY2RP49146 381 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ARHGDIAP52565 204 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 SLC7A2P52569 658 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 SPCS3P61009 180 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 DSC2Q02487 901 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 TARDBPQ13148 414 aaKnown RBP eCLIP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PDCLQ13371 301 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ELOAQ14241 798 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PON2Q15165 354 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 CCDC6Q16204 474 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 GRIK5Q16478 980 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 CAMK4Q16566 473 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ANKRD20A4Q4UJ75 823 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 LBHQ53QV2 105 aaPredicted RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 TNFAIP8L3Q5GJ75 292 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ADGRF1Q5T601 910 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ALG1LQ6GMV1 187 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ETV3LQ6ZN32 361 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 FBXO11Q86XK2 927 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 VSTM4Q8IW00 320 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ZNF654Q8IZM8 581 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 RIBC1Q8N443 379 aaPredicted RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 FAM109AQ8N4B1 249 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ZNF527Q8NB42 609 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 C3orf58Q8NDZ4 430 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 PIWIL2Q8TC59 973 aaKnown RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ZNF507Q8TCN5 953 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 URGCPQ8TCY9 931 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 ZNF384Q8TF68 577 aa5.27□□□□□ -1.57
UBE4A-203ENST00000545354 CCDC12Q8WUD4 166 aaPredicted RBP5.27□□□□□ -1.57
UBE4A-203ENST00000545354 TRIM43Q96BQ3 446 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms