RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.64□□□□□ -1.19
COPA-207ENST00000545284 KDM1BQ8NB78 822 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 OR4C6Q8NH72 309 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 RAD54LQ92698 747 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 SAAL1Q96ER3 474 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 SERAC1Q96JX3 654 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 MRPL45Q9BRJ2 306 aaKnown RBP7.64□□□□□ -1.19
COPA-207ENST00000545284 TRIM4Q9C037 500 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 PABPC3Q9H361 631 aaKnown RBP7.64□□□□□ -1.19
COPA-207ENST00000545284 KDM4CQ9H3R0 1056 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 OLFML3Q9NRN5 406 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
COPA-207ENST00000545284 NCKIPSDQ9NZQ3 722 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 ATXN7L1Q9ULK2 861 aaPredicted RBP7.64□□□□□ -1.19
COPA-207ENST00000545284 DMTF1Q9Y222 760 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 PCDHA5Q9Y5H7 936 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 AHCTF1Q8WYP5 2266 aa7.64□□□□□ -1.19
COPA-207ENST00000545284 NOTCH2Q04721 2471 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 VWA3AA6NCI4 1184 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 NEMP2A6NFY4 417 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 CLDN5O00501 218 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 SIGLEC6O43699 453 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 CSO75390 466 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 TCEA3O75764 348 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 KLKB1P03952 638 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 ALPPL2P10696 532 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 RARGP13631 454 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 TRIM21P19474 475 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 FOSBP53539 338 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 TLE1Q04724 770 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 KCNJ12Q14500 433 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 BMT2Q1RMZ1 405 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 ISXQ2M1V0 245 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 FNDC3BQ53EP0 1204 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 MPPE1Q53F39 396 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 C10orf120Q5SQS8 335 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 SCARA3Q6AZY7 606 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 NAPEPLDQ6IQ20 393 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 NCEH1Q6PIU2 408 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 TRAPPC11Q7Z392 1133 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 CACUL1Q86Y37 369 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 SYCP3Q8IZU3 236 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 AHI1Q8N157 1196 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 FAM26EQ8N5C1 309 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 OR5B17Q8NGF7 314 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 WDR48Q8TAF3 677 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 DDI1Q8WTU0 396 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 BHMTQ93088 406 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 SYAP1Q96A49 352 aaPredicted RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 SGF29Q96ES7 293 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 IFT43Q96FT9 208 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 PLIN2Q99541 437 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 MED10Q9BTT4 135 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 DUSP23Q9BVJ7 150 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 SLC25A18Q9H1K4 315 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 DPEP3Q9H4B8 488 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 MRPL44Q9H9J2 332 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 EBF2Q9HAK2 575 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 BLOC1S4Q9NUP1 217 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 FBXL12Q9NXK8 326 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.63□□□□□ -1.19
COPA-207ENST00000545284 ACSL6Q9UKU0 697 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 NME7Q9Y5B8 376 aa7.63□□□□□ -1.19
COPA-207ENST00000545284 TARSL2A2RTX5 802 aaKnown RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 FAM47DPA6NHR8 397 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 TRIM38O00635 465 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 CYP26A1O43174 497 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 AP1G2O75843 785 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 CST3P01034 146 aaPredicted RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 ITGA2BP08514 1039 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 GOT1P17174 413 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 HLA-FP30511 346 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 PGFP49763 221 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 CLN3Q13286 438 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 MCM6Q14566 821 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 STAT4Q14765 748 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 MPP7Q5T2T1 576 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 USP53Q70EK8 1073 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 SND1Q7KZF4 910 aaKnown RBP eCLIP7.62□□□□□ -1.197e-8■□□□□ 9.6
COPA-207ENST00000545284 CCDC186Q7Z3E2 898 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 PRPF39Q86UA1 669 aaKnown RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 FUKQ8N0W3 1084 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 CRYBG2Q8N1P7 616 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 SLC25A45Q8N413 288 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 WDR36Q8NI36 951 aaKnown RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 SORCS1Q8WY21 1168 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 P2RY11Q96G91 374 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 SMOQ99835 787 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 OMDQ99983 421 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 ADNPQ9H2P0 1102 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 KRT82Q9NSB4 513 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 GEMIN8Q9NWZ8 242 aaKnown RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 OSER1Q9NX31 292 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 NLGN3Q9NZ94 848 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 STOML2Q9UJZ1 356 aa7.62□□□□□ -1.19
COPA-207ENST00000545284 AGO1Q9UL18 857 aaKnown RBP7.62□□□□□ -1.19
COPA-207ENST00000545284 SATB2Q9UPW6 733 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms