RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 SHOC2Q9UQ13 582 aa5.43□□□□□ -1.54
USP28-213ENST00000544967 PCDHB2Q9Y5E7 798 aa5.43□□□□□ -1.54
USP28-213ENST00000544967 SF3B1O75533 1304 aaKnown RBP eCLIP5.42□□□□□ -1.54
USP28-213ENST00000544967 EXOC1LA0A1B0GW35 172 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 GSTTP1A0A1W2PQM5 241 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ANKRD63C9JTQ0 380 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FBP2O00757 339 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FCHO1O14526 889 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 KIAA0355O15063 1070 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 KRT38O76015 456 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CCNE2O96020 404 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 HOXA13P31271 388 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 SLC5A2P31639 672 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PHBP35232 272 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CHKAP35790 457 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MAGEA4P43358 317 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 BCAP31P51572 246 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ARPC4P59998 168 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FOXK1P85037 733 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 KRT76Q01546 638 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TNFAIP2Q03169 654 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ENPEPQ07075 957 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 GRM1Q13255 1194 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MORF4L2Q15014 288 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 KNOP1Q1ED39 458 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 MAP7D1Q3KQU3 841 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FAAH2Q6GMR7 532 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 DCLRE1AQ6PJP8 1040 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FRA10AC1Q70Z53 315 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TLK2Q86UE8 772 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TREML1Q86YW5 311 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TMEM151BQ8IW70 566 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TPH2Q8IWU9 490 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FBXO16Q8IX29 292 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 SLFN12Q8IYM2 578 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 BANPQ8N9N5 519 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PCSK9Q8NBP7 692 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 ARRDC4Q8NCT1 418 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 GSDMBQ8TAX9 411 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ACTRT2Q8TDY3 377 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MZB1Q8WU39 189 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 DLG3Q92796 817 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ZMAT2Q96NC0 199 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 SLC39A3Q9BRY0 314 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TMEM120AQ9BXJ8 343 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MAK16Q9BXY0 300 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 WDR11Q9BZH6 1224 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 DCLK3Q9C098 648 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 NACA2Q9H009 215 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MRPL46Q9H2W6 279 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 DHX33Q9H6R0 707 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 OSGEPQ9NPF4 335 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PDLIM7Q9NR12 457 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 GRID1Q9ULK0 1009 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 STRIP2Q9ULQ0 834 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PSMD13Q9UNM6 376 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FAF1Q9UNN5 650 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 GIT1Q9Y2X7 761 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MAD1L1Q9Y6D9 718 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MYH11P35749 1972 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FNDC1Q4ZHG4 1894 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 FUOMA2VDF0 154 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ITM2AO43736 263 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 SLC37A4O43826 429 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 KLHL2O95198 593 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CFBP00751 764 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ETS2P15036 469 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 SLC9A1P19634 815 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CA4P22748 312 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 NR2F2P24468 414 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 DNAJB2P25686 324 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 ADSSP30520 456 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PTPN7P35236 360 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TCF7P36402 384 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 CPOXP36551 454 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 GALK1P51570 392 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 JAK3P52333 1124 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 DLG4P78352 724 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 FOLH1Q04609 750 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 IKQ13123 557 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 EIF2B5Q13144 721 aaKnown RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 ZNF211Q13398 564 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 MTMR1Q13613 665 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 HIC1Q14526 733 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 TMED2Q15363 201 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CALCRLQ16602 461 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 MYLK3Q32MK0 819 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CCDC14Q49A88 953 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 SGO2Q562F6 1265 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 SFT2D3Q587I9 215 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 NEK10Q6ZWH5 1172 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 CCDC33Q8N5R6 958 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 PDPRQ8NCN5 879 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 LILRB1Q8NHL6 650 aaPredicted RBP5.42□□□□□ -1.54
USP28-213ENST00000544967 TBCKQ8TEA7 893 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 AGPAT1Q99943 283 aa5.42□□□□□ -1.54
USP28-213ENST00000544967 HSD17B14Q9BPX1 270 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms