RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MLNP12872 115 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 AXLP30530 894 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 CATSPER2Q96P56 530 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 SOX13Q9UN79 622 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ENO4A6NNW6 628 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ITGB5P18084 799 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 NR6A1Q15406 480 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ATP6AP1LQ52LC2 224 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 RETSATQ6NUM9 610 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 BNC2Q6ZN30 1099 aaPredicted RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 ELOVL4Q9GZR5 314 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 PLK1P53350 603 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ZCCHC23Q6ZST2 131 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 POPDC2Q9HBU9 364 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 GP5P40197 560 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ZNF844Q08AG5 666 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 TP53BP2Q13625 1128 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 WLSQ5T9L3 541 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 HMX1Q9NP08 348 aaPredicted RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 TM9SF1O15321 606 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 KDM1AO60341 852 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 GRK2P25098 689 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 SERPINB10P48595 397 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 MIIPQ5JXC2 388 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 ZNF786Q8N393 782 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 ELOVL6Q9H5J4 265 aa13.11□□□□□ -0.31
CHD4-211ENST00000544484 LRRC10BA6NIK2 292 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 FGFR1P11362 822 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 PLD1Q13393 1074 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 A0A096LPK6 155 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 MGAT4DA6NG13 374 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 CENPAP49450 140 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 GTF2BQ00403 316 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 CAPSQ13938 189 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 SCN3BQ9NY72 215 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 KDELR1P24390 212 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 PPIL2Q13356 520 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 RRN3Q9NYV6 651 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 APOA1P02647 267 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 CRADDP78560 199 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 UGCGQ16739 394 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 MICU2Q8IYU8 434 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 OR5B17Q8NGF7 314 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 IKZF4Q9H2S9 585 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 SLC1A6P48664 564 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 ALDH6A1Q02252 535 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 BBS7Q8IWZ6 715 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 LPPQ93052 612 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 MED8Q96G25 268 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 COPS7BQ9H9Q2 264 aaPredicted RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 DYRK1BQ9Y463 629 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 MAGEB16A2A368 324 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 B4GALT5O43286 388 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 CCNG1P51959 295 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 ECM1Q16610 540 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 RD3Q7Z3Z2 195 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 TSEN2Q8NCE0 465 aaKnown RBP13.1□□□□□ -0.31
CHD4-211ENST00000544484 CDT1Q9H211 546 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 IMPAD1Q9NX62 359 aa13.1□□□□□ -0.31
CHD4-211ENST00000544484 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 WDR47O94967 919 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ZNF682O95780 498 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 APOC2P02655 101 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms