RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PDGFRAP16234 1089 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 PTPN4P29074 926 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 TAP1Q03518 808 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 HADHQ16836 314 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 PMF1Q6P1K2 205 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 PPP1R21Q6ZMI0 780 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 C4orf50Q6ZRC1 276 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 SCUBE3Q8IX30 993 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 CLEC4CQ8WTT0 213 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 ZFP42Q96MM3 310 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 GOLGA2P5Q9HBQ8 144 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 CHST12Q9NRB3 414 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 UBQLN1Q9UMX0 589 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 HEY1Q9Y5J3 304 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 MGEA5O60502 916 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 STAU1O95793 577 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 ELK3P41970 407 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 GEMIN4P57678 1058 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 SESN3P58005 492 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 LSAMPQ13449 338 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 DPYSL3Q14195 570 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 TAZQ16635 292 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 PLEKHG4Q58EX7 1191 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 C9orf57Q5W0N0 161 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 ACOT1Q86TX2 421 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 PRPF39Q86UA1 669 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 SLC43A3Q8NBI5 491 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 NRG4Q8WWG1 115 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 MRPL45Q9BRJ2 306 aaKnown RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 PSMC3IPQ9P2W1 217 aaPredicted RBP15.48■□□□□ 0.07
CHFR-223ENST00000544268 ACTL7BQ9Y614 415 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 COMMD3-BMI1R4GMX3 469 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 MED7O43513 233 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 P4HA1P13674 534 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 IL4RP24394 825 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 SLC34A1Q06495 639 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 EFHC2Q5JST6 749 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 FAM26DQ5JW98 314 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 PPP1R26Q5T8A7 1209 aaPredicted RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 PPP1R2P3Q6NXS1 205 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 DARS2Q6PI48 645 aaKnown RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 LRRC74BQ6ZQY2 392 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 PPFIBP2Q8ND30 876 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 MZB1Q8WU39 189 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 LPPQ93052 612 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 TTC25Q96NG3 672 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 CYP3A43Q9HB55 503 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 C2orf71A6NGG8 1288 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 KBTBD13C9JR72 458 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 APOC4-APOC2K7ER74 178 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 PTGESO14684 152 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 HNRNPCL1O60812 293 aaKnown RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 APOC2P02655 101 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 CKBP12277 381 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 ARL4CP56559 192 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 AP1B1Q10567 949 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 SMAD1Q15797 465 aaKnown RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 TDRPQ86YL5 185 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 STKLD1Q8NE28 680 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 TCP10LQ8TDR4 215 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 DCAKDQ8WVC6 231 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 LZICQ8WZA0 190 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 SERAC1Q96JX3 654 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 MIS12Q9H081 205 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 DPEP3Q9H4B8 488 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 NGRNQ9NPE2 291 aaKnown RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 LNPEPQ9UIQ6 1025 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 SNX9Q9Y5X1 595 aa15.47■□□□□ 0.07
CHFR-223ENST00000544268 MKI67P46013 3256 aaKnown RBP15.47■□□□□ 0.07
CHFR-223ENST00000544268 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 PRPF4O43172 522 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHFR-223ENST00000544268 CBX6O95503 412 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 ZNF24P17028 368 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 AFF1P51825 1210 aaKnown RBP15.46■□□□□ 0.07
CHFR-223ENST00000544268 SPARCL1Q14515 664 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 RCN1Q15293 331 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 GOLGA7BQ2TAP0 167 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 ZNF449Q6P9G9 518 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 OTOAQ7RTW8 1153 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 TTC30AQ86WT1 665 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 PALM2Q8IXS6 379 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 FNIP1Q8TF40 1166 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 C17orf50Q8WW18 174 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 DEFB118Q96PH6 123 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 NPHS2Q9NP85 383 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 DCTN4Q9UJW0 460 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 ZNF510Q9Y2H8 683 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 MFHAS1Q9Y4C4 1052 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 H7C0C1 242 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 ARVCFO00192 962 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 UGT1A9O60656 530 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 MLH1P40692 756 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 ATP5OP48047 213 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 KBTBD12Q3ZCT8 623 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 TRAF7Q6Q0C0 670 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 RIBC1Q8N443 379 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms