RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ACTN2P35609 894 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GLUD2P49448 558 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PSEN1P49768 467 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GYS2P54840 703 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 IFFO1Q0D2I5 559 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TAF10Q12962 218 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TAB3Q8N5C8 712 aaPredicted RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 CCDC33Q8N5R6 958 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TFB1MQ8WVM0 346 aaKnown RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TTLL2Q9BWV7 592 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 LRRC4CQ9HCJ2 640 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TLR8Q9NR97 1041 aaKnown RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 AFF4Q9UHB7 1163 aaKnown RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 RAD54BQ9Y620 910 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GOLGA6CA6NDK9 693 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 C5orf60A6NFR6 353 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GOLGA6L10A6NI86 522 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 SLC38A8A6NNN8 435 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 KCNU1A8MYU2 1149 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PAGE1O75459 146 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GCATO75600 419 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GOLGA6DP0CG33 693 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 MAGEA4P43358 317 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PDK1Q15118 436 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PRKD1Q15139 912 aaPredicted RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 KYNUQ16719 465 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 RASIP1Q5U651 963 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 C4orf22Q6V702 233 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 OTOP2Q7RTS6 562 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 DDX53Q86TM3 631 aaKnown RBP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GIPC2Q8TF65 315 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 SLC39A13Q96H72 371 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PKNOX2Q96KN3 472 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TMEM109Q9BVC6 243 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 PHACTR1Q9C0D0 580 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.47■□□□□ 0.87
COPS7A-218ENST00000543939 GOLGA6AQ9NYA3 693 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TLR6Q9Y2C9 796 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 TCRBV7S3A2A0A539 114 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 TMEM63AO94886 807 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 ABLIM3O94929 683 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 ZDHHC11BP0C7U3 371 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 VAV1P15498 845 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 TUFMP49411 452 aaKnown RBP20.46■□□□□ 0.87
COPS7A-218ENST00000543939 BASP1P80723 227 aaKnown RBP20.46■□□□□ 0.87
COPS7A-218ENST00000543939 KCNJ11Q14654 390 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 HEATR6Q6AI08 1181 aaKnown RBP20.46■□□□□ 0.87
COPS7A-218ENST00000543939 PDZD4Q76G19 769 aaPredicted RBP20.46■□□□□ 0.87
COPS7A-218ENST00000543939 CCDC110Q8TBZ0 833 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 ATP6V1G3Q96LB4 118 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 YME1L1Q96TA2 773 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 LGMNQ99538 433 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 SAYSD1Q9NPB0 183 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 NEU3Q9UQ49 428 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 NUP205Q92621 2012 aa20.46■□□□□ 0.87
COPS7A-218ENST00000543939 CHADO15335 359 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 ACSL3O95573 720 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 EPHB2P29323 1055 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 GAD2Q05329 585 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 GABPB1Q06547 395 aaPredicted RBP20.45■□□□□ 0.86
COPS7A-218ENST00000543939 KRT71Q3SY84 523 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 FAM182AQ5T1J6 154 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 ARTNQ5T4W7 220 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 TPGS2Q68CL5 300 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 CENPUQ71F23 418 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 ZNF461Q8TAF7 563 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 UHMK1Q8TAS1 419 aaKnown RBP20.45■□□□□ 0.86
COPS7A-218ENST00000543939 HTR3CQ8WXA8 447 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 PRDM12Q9H4Q4 367 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 RAB6BQ9NRW1 208 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 OLA1Q9NTK5 396 aaKnown RBP20.45■□□□□ 0.86
COPS7A-218ENST00000543939 ADAM21Q9UKJ8 722 aa20.45■□□□□ 0.86
COPS7A-218ENST00000543939 HMGB1P1B2RPK0 211 aaPredicted RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 GOLGA8MH3BSY2 632 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 PPP1R12AO14974 1030 aaPredicted RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 ALOX15BO15296 676 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 SEC24AO95486 1093 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 HOXC13P31276 330 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 HTR7P34969 479 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 HIF1AQ16665 826 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 MANEALQ5VSG8 457 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 TP53INP2Q8IXH6 220 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 NPWQ8N729 165 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 NETO2Q8NC67 525 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 FCRL2Q96LA5 508 aaPredicted RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 C9orf72Q96LT7 481 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 SIK2Q9H0K1 926 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 XPO7Q9UIA9 1087 aaKnown RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 SLC2A3P11169 496 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 MAGEA6P43360 314 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 ARL4CP56559 192 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 TBX4P57082 545 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 NRG1Q02297 640 aaPredicted RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 EFEMP1Q12805 493 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 PPIGQ13427 754 aaKnown RBP eCLIP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 AGBL2Q5U5Z8 902 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 KCTD16Q68DU8 428 aa20.44■□□□□ 0.86
COPS7A-218ENST00000543939 FAM76AQ8TAV0 307 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms