RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TRMT10CQ7L0Y3 403 aaKnown RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 C16orf59Q7L2K0 433 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 HOOK3Q86VS8 718 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 RELL1Q8IUW5 271 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 FAM71DQ8N9W8 422 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 STKLD1Q8NE28 680 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 UBLCP1Q8WVY7 318 aaPredicted RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 EPAS1Q99814 870 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 CLSTN3Q9BQT9 956 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 PHACTR1Q9C0D0 580 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 MCOLN1Q9GZU1 580 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 C10orf88Q9H8K7 445 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 USP29Q9HBJ7 922 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 TLR8Q9NR97 1041 aaKnown RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 OLA1Q9NTK5 396 aaKnown RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 ETNK2Q9NVF9 386 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 DTLQ9NZJ0 730 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 ZNF638Q14966 1978 aaKnown RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 SLC38A8A6NNN8 435 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 FAM72CH0Y354 149 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 H0YGN5 161 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 CREB3O43889 395 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 MFSD11O43934 449 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 NUDT17P0C025 328 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 ZDHHC11BP0C7U3 371 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 CCR1P32246 355 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 CHKAP35790 457 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 CREMQ03060 361 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 SLC10A2Q12908 348 aaPredicted RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 FAM72AQ5TYM5 149 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 FAM72DQ6L9T8 149 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 C4orf22Q6V702 233 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 OTOP2Q7RTS6 562 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 FAM72BQ86X60 149 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 EPB41L4BQ9H329 900 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 PAK5Q9P286 719 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 PRKAG2Q9UGJ0 569 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 NFS1Q9Y697 457 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 KCNN4O15554 427 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 GJB5O95377 273 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 FGBP02675 491 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 URODP06132 367 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 RPL17P18621 184 aaKnown RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 NRG1Q02297 640 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 TAF10Q12962 218 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 PSRC1Q6PGN9 363 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 PDZD4Q76G19 769 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 PPIL6Q8IXY8 311 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 ZNF461Q8TAF7 563 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 OVCA2Q8WZ82 227 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 RNF34Q969K3 372 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
GNE-206ENST00000543356 SFMBT1Q9UHJ3 866 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 MAFFQ9ULX9 164 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 TTC36A6NLP5 189 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 KCNU1A8MYU2 1149 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 GOLGA8KD6RF30 607 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 MSI1O43347 362 aaKnown RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 SLC2A3P11169 496 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 RBL1P28749 1068 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 HOXC13P31276 330 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 EIF3BP55884 814 aaKnown RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 RAB33AQ14088 237 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 PRKD1Q15139 912 aaPredicted RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 DENND2CQ68D51 928 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 ZNF276Q8N554 614 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 NAT8LQ8N9F0 302 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 PDZD8Q8NEN9 1154 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 TFB1MQ8WVM0 346 aaKnown RBP9.63□□□□□ -0.87
GNE-206ENST00000543356 BADQ92934 168 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 SLC39A13Q96H72 371 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.63□□□□□ -0.87
GNE-206ENST00000543356 FNIP2Q9P278 1114 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 OR12D3Q9UGF7 316 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 NEU3Q9UQ49 428 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 PCDHB12Q9Y5F1 795 aa9.63□□□□□ -0.87
GNE-206ENST00000543356 KLHL33A6NCF5 533 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 ZBBXA8MT70 800 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 C2CD2LO14523 706 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 RIPK2O43353 540 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 GCATO75600 419 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 LINC00271P0C7V0 271 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 ERCC2P18074 760 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 ACTN2P35609 894 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 PDK1Q15118 436 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 CCDC25Q86WR0 208 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 FIBCD1Q8N539 461 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 CPT1BQ92523 772 aa9.62□□□□□ -0.87
GNE-206ENST00000543356 FCRL2Q96LA5 508 aaPredicted RBP9.62□□□□□ -0.87
GNE-206ENST00000543356 CDK5RAP1Q96SZ6 601 aaKnown RBP9.62□□□□□ -0.87
GNE-206ENST00000543356 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
GNE-206ENST00000543356 CDC42EP4Q9H3Q1 356 aaKnown RBP9.62□□□□□ -0.87
GNE-206ENST00000543356 C5orf60A6NFR6 353 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms