RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 BHLHA9Q7RTU4 235 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 FMNL3Q8IVF7 1028 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 SETD7Q8WTS6 366 aaKnown RBP16.18■□□□□ 0.18
CSF1R-209ENST00000543093 ADAMTS14Q8WXS8 1223 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 IL21RQ9HBE5 538 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 EIF2B4Q9UI10 523 aaKnown RBP16.18■□□□□ 0.18
CSF1R-209ENST00000543093 LHX6Q9UPM6 363 aa16.18■□□□□ 0.18
CSF1R-209ENST00000543093 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 TAF4O00268 1085 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 PMM2O15305 246 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 TIMM44O43615 452 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 HLA-EP13747 358 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 HOXD9P28356 352 aaPredicted RBP16.17■□□□□ 0.18
CSF1R-209ENST00000543093 PDE4CQ08493 712 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 LRMPQ12912 555 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 MPPE1Q53F39 396 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 EDEM1Q92611 657 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 NT5C1BQ96P26 610 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 GAREM1Q9H706 876 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 OLA1Q9NTK5 396 aaKnown RBP16.17■□□□□ 0.18
CSF1R-209ENST00000543093 SFMBT1Q9UHJ3 866 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 TSPAN16Q9UKR8 245 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 PCOLCE2Q9UKZ9 415 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 APOBEC2Q9Y235 224 aaKnown RBP16.17■□□□□ 0.18
CSF1R-209ENST00000543093 PLXNB3Q9ULL4 1909 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 PTPRBP23467 1997 aa16.17■□□□□ 0.18
CSF1R-209ENST00000543093 TMEM131Q92545 1883 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 ZFYVE26Q68DK2 2539 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 SPEGQ15772 3267 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 XPO1O14980 1071 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 P4HA2O15460 535 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 CBFA2T3O75081 653 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 CER1O95813 267 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 HLA-FP30511 346 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 MATKP42679 507 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 HARS2P49590 506 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 BCAT1P54687 386 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 BNC1Q01954 994 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 ADIGQ0VDE8 80 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 SCAPQ12770 1279 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 PROSER1Q86XN7 944 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 TRIM59Q8IWR1 403 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 ZNF366Q8N895 744 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 OR2T3Q8NH03 318 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 RNF139Q8WU17 664 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 CYB5D2Q8WUJ1 264 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 SNX19Q92543 992 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 LHX5Q9H2C1 402 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 TM7SF3Q9NS93 570 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 HESX1Q9UBX0 185 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 RWDD2AQ9UIY3 292 aa16.16■□□□□ 0.18
CSF1R-209ENST00000543093 FNDC3AQ9Y2H6 1198 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 HBS1LQ9Y450 684 aaKnown RBP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
CSF1R-209ENST00000543093 NUMA1Q14980 2115 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 AFPP02771 609 aaKnown RBP16.15■□□□□ 0.18
CSF1R-209ENST00000543093 CAPNS1P04632 268 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 CD19P15391 556 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 BST2Q10589 180 aaKnown RBP16.15■□□□□ 0.18
CSF1R-209ENST00000543093 CAMK2GQ13555 558 aaPredicted RBP16.15■□□□□ 0.18
CSF1R-209ENST00000543093 COL9A2Q14055 689 aaPredicted RBP16.15■□□□□ 0.18
CSF1R-209ENST00000543093 HLA-BQ31612 363 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 SGO2Q562F6 1265 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 BSPRYQ5W0U4 402 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 IL27RAQ6UWB1 636 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 CHST9Q7L1S5 443 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 GLRX5Q86SX6 157 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 SLCO6A1Q86UG4 719 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 SIX6OS1Q8N1H7 587 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 PPM1KQ8N3J5 372 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 UBA3Q8TBC4 463 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 WFIKKN2Q8TEU8 576 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 IPO9Q96P70 1041 aaKnown RBP16.15■□□□□ 0.18
CSF1R-209ENST00000543093 NUP62CLQ9H1M0 184 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 SLCO1B1Q9Y6L6 691 aa16.15■□□□□ 0.18
CSF1R-209ENST00000543093 ADAMTS20P59510 1910 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 A0A1B0GVT2 93 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 YJEFN3A6XGL0 299 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 E7ENQ6 273 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 MSI1O43347 362 aaKnown RBP16.14■□□□□ 0.17
CSF1R-209ENST00000543093 ZNF883P0CG24 379 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 ACSL1P33121 698 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 ZNF445P59923 1031 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 KCNH2Q12809 1159 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 ADGRF1Q5T601 910 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 CCNI2Q6ZMN8 369 aaPredicted RBP16.14■□□□□ 0.17
CSF1R-209ENST00000543093 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 ADIPOR2Q86V24 386 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 UBR7Q8N806 425 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 MLKLQ8NB16 471 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 C1orf216Q8TAB5 229 aa16.14■□□□□ 0.17
CSF1R-209ENST00000543093 TMA16Q96EY4 203 aaKnown RBP16.14■□□□□ 0.17
CSF1R-209ENST00000543093 GBP4Q96PP9 640 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms