RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ELAC2Q9BQ52 826 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SELENOSQ9BQE4 189 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC1Q9BTT6 524 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 KIFC3Q9BVG8 833 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NUSAP1Q9BXS6 441 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MROQ9BYG7 248 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 VPS11Q9H270 941 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SLA2Q9H6Q3 261 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ACSS3Q9H6R3 686 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RAVER2Q9HCJ3 691 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RIC8AQ9NPQ8 531 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PAQR5Q9NXK6 330 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NDE1Q9NXR1 346 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NPAP1Q9NZP6 1156 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM9Q9P0T7 183 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 AMACRQ9UHK6 382 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TEKT2Q9UIF3 430 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 HDAC9Q9UKV0 1011 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SLC8A2Q9UPR5 921 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PA2G4Q9UQ80 394 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ERGIC3Q9Y282 383 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 AP3M1Q9Y2T2 418 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NOC2LQ9Y3T9 749 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RWDD3Q9Y3V2 267 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 EPN1Q9Y6I3 576 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TUBGCP6Q96RT7 1819 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SALL1Q9NSC2 1324 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ATP10DQ9P241 1426 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 A0A1W2PQC6 194 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 KRBA1A5PL33 1030 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SMCO2A6NFE2 343 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC160A6NGH7 325 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 B2RBV5 119 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PI4K2BG5E9Z4 385 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC188H7C350 402 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PSMD9O00233 223 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 BTN3A1O00481 513 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 DDX3XO00571 662 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CAPN9O14815 690 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 HDAC3O15379 428 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MAGEB2O15479 319 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ITM2AO43736 263 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 NUAK1O60285 661 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ACSL4O60488 711 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TLR2O60603 784 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CLEC3AO75596 197 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 WDPCPO95876 746 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ATP1A1P05023 1023 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CAPN1P07384 714 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RARBP10826 455 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 GFAPP14136 432 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CPA1P15085 419 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RAC2P15153 192 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CHN1P15882 459 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PRKCAP17252 672 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ITGA2P17301 1181 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ITGB6P18564 788 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CDH2P19022 906 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ITIH1P19827 911 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MARCKSP29966 332 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 POLR2BP30876 1174 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 HTR7P34969 479 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 HSD17B3P37058 310 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 GDI2P50395 445 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CCR3P51677 355 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ARHGDIBP52566 201 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SLC18A1P54219 525 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 VCPP55072 806 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MAGOHP61326 146 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 KRR1Q13601 381 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 GALNT3Q14435 633 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SNX17Q15036 470 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 OXA1LQ15070 435 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SLC15A2Q16348 729 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ASIC2Q16515 512 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 GEN1Q17RS7 908 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TRIM16LQ309B1 348 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF792Q3KQV3 632 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TIGD2Q4W5G0 525 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SLC45A4Q5BKX6 768 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 IGSF11Q5DX21 431 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TNFAIP8L3Q5GJ75 292 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 LMBRD2Q68DH5 695 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 FAM109BQ6ICB4 259 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MFSD5Q6N075 450 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 KIAA1211LQ6NV74 962 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TATDN1Q6P1N9 297 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MACC1Q6ZN28 852 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RGS9BPQ6ZS82 235 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SPATA31D4Q6ZUB0 917 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms