RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CMTM5Q96DZ9 223 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 EFHD1Q9BUP0 239 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 NDFIP2Q9NV92 336 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 HADHAP40939 763 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 OLIG2Q13516 323 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 FLOT2Q14254 428 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
VARS2-212ENST00000542001 PIWIL1Q96J94 861 aaKnown RBP16.53■□□□□ 0.24
VARS2-212ENST00000542001 SENP8Q96LD8 212 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 PARK7Q99497 189 aaKnown RBP16.53■□□□□ 0.24
VARS2-212ENST00000542001 EGFL8Q99944 293 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 MSCO60682 206 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 USP1O94782 785 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 ATP4AP20648 1035 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 NOVP48745 357 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 RTP1P59025 263 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 CDK16Q00536 496 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 TWF1Q12792 350 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 SCARA3Q6AZY7 606 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 MFSD5Q6N075 450 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
VARS2-212ENST00000542001 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 SNX2O60749 519 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 KLHL2O95198 593 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
VARS2-212ENST00000542001 PDPK2PQ6A1A2 396 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 FAM13CQ8NE31 585 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 STK32AQ8WU08 396 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 CNBD2Q96M20 576 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 GMLQ99445 158 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 PNPOQ9NVS9 261 aa16.53■□□□□ 0.24
VARS2-212ENST00000542001 ANKRD12Q6UB98 2062 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 AKAP10O43572 662 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 FDFT1P37268 417 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 PTDSS1P48651 473 aaKnown RBP16.52■□□□□ 0.24
VARS2-212ENST00000542001 CTBP1Q13363 440 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.24
VARS2-212ENST00000542001 TEKT4Q8WW24 435 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.24
VARS2-212ENST00000542001 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 SUN2Q9UH99 717 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 CHKBQ9Y259 395 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 CDY1Q9Y6F8 540 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 ERCC2P18074 760 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 MAXP61244 160 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 ARHGAP8P85298 464 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 TMED1Q13445 227 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 SLC45A4Q5BKX6 768 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 NAPEPLDQ6IQ20 393 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 SERAC1Q96JX3 654 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 XPNPEP3Q9NQH7 507 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
VARS2-212ENST00000542001 ATP6AP2A0A1C7CYW4 349 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 PFDN1O60925 122 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 ATP6AP2O75787 350 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 FUT11Q495W5 492 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 SPDYCQ5MJ68 293 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 ANGPTL8Q6UXH0 198 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 FRA10AC1Q70Z53 315 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 CRYL1Q9Y2S2 319 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 AK5Q9Y6K8 562 aa16.52■□□□□ 0.23
VARS2-212ENST00000542001 ERI2A8K979 691 aaKnown RBP16.51■□□□□ 0.23
VARS2-212ENST00000542001 SMAPO00193 183 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 XRCC4Q13426 336 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CERCAMQ5T4B2 595 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 ZNF470Q6ECI4 717 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
VARS2-212ENST00000542001 TDRD5Q8NAT2 981 aaKnown RBP16.51■□□□□ 0.23
VARS2-212ENST00000542001 NCLNQ969V3 563 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 TRPC7Q9HCX4 862 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 TAGLN3Q9UI15 199 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CXCL11O14625 94 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CILPO75339 1184 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 PREPLQ4J6C6 727 aaPredicted RBP16.51■□□□□ 0.23
VARS2-212ENST00000542001 CYP2R1Q6VVX0 501 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
VARS2-212ENST00000542001 KCNMB4Q86W47 210 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CCDC185Q8N715 623 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 ZNF358Q9NW07 568 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 OR12D3Q9UGF7 316 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 PEX1O43933 1283 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 HOXC6P09630 235 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
VARS2-212ENST00000542001 ANKRD20A4Q4UJ75 823 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CLNKQ7Z7G1 428 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 NDNQ99608 321 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 CDYLQ9Y232 598 aa16.51■□□□□ 0.23
VARS2-212ENST00000542001 IQCA1LA6NCM1 817 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 CCL22O00626 93 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 GSTA4O15217 222 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 PTPN1P18031 435 aaKnown RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 NFKB1P19838 968 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 GMPRP36959 345 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms