RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 NEK9Q8TD19 979 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TRAPPC12Q8WVT3 735 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GJA10Q969M2 543 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TOP1MTQ969P6 601 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 CCDC43Q96MW1 224 aaKnown RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 SCLT1Q96NL6 688 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GUCD1Q96NT3 240 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 SAMD11Q96NU1 681 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 YME1L1Q96TA2 773 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 RAB34Q9BZG1 259 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 INO80BQ9C086 356 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 SLC6A15Q9H2J7 730 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TTYH1Q9H313 450 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TTC12Q9H892 705 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 BCO1Q9HAY6 547 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TLR9Q9NR96 1032 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GINS2Q9Y248 185 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 NR2E1Q9Y466 385 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 CEP290O15078 2479 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 A0A1B0GTL3 188 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 DENND3A2RUS2 1198 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 C2orf78A6NCI8 922 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 ASAP2O43150 1006 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 SGTAO43765 313 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 C22orf31O95567 290 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 FTLP02792 175 aaPredicted RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 CA3P07451 260 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 ZNF888P0CJ79 500 aaPredicted RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 VSIG10L2P0DP72 767 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 MYOGP15173 224 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 CD52P31358 61 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 MCM7P33993 719 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 CRHR1P34998 444 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 NLRP11P59045 1033 aaKnown RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 DEFB103AP81534 67 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 ST3GAL1Q11201 340 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 EARS2Q5JPH6 523 aaKnown RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 OGFOD2Q6N063 350 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 DAAM2Q86T65 1068 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 KBTBD2Q8IY47 623 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 POU5F2Q8N7G0 328 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 C3orf20Q8ND61 904 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 OR7D4Q8NG98 312 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 TCP11Q8WWU5 503 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 HAS1Q92839 578 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 RGMAQ96B86 450 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 CEP170P1Q96L14 293 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 TGS1Q96RS0 853 aaKnown RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 GCOM2Q9BZD3 368 aaPredicted RBP5.91□□□□□ -1.46
CPSF7-220ENST00000541963 LANCL2Q9NS86 450 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 TMEM140Q9NV12 185 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 ING3Q9NXR8 418 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 NCDNQ9UBB6 729 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 PADI3Q9ULW8 664 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 PCDHB7Q9Y5E2 793 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 TRIOBPQ9H2D6 2365 aa5.91□□□□□ -1.46
CPSF7-220ENST00000541963 LAD1O00515 517 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ARHGAP6O43182 974 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MTSS1O43312 755 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 GPR32O75388 356 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 TOX4O94842 621 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 UBXN7O94888 489 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 SLITRK3O94933 977 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 LYPLA2O95372 231 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 VTNP04004 478 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 KRT1P04264 644 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 OR52Z1P0C646 297 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MUTP22033 750 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 U2AF2P26368 475 aaKnown RBP eCLIP5.9□□□□□ -1.469e-9■■■□□ 15
CPSF7-220ENST00000541963 GJB2P29033 226 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 YWHABP31946 246 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 PTPN7P35236 360 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 TECP42680 631 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 KCNC1P48547 511 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CLCN3P51790 818 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 POLGP54098 1239 aaPredicted RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 HTRA4P83105 476 aaPredicted RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 TAP1Q03518 808 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 NCBP1Q09161 790 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CTTNQ14247 550 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 PDIA5Q14554 519 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 RAB39AQ14964 217 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 BRD3Q15059 726 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 UGCGQ16739 394 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 VMACQ2NL98 169 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MST1LQ2TV78 715 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 COBLL1Q53SF7 1204 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 RILPL1Q5EBL4 403 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 XKR9Q5GH70 373 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 HAUS3Q68CZ6 603 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CCDC149Q6ZUS6 474 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 SLC24A5Q71RS6 500 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ANO5Q75V66 913 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ZNF761Q86XN6 746 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms