RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SGK2Q9HBY8 427 aa28■■■□□ 2.07
CHFR-218ENST00000540963 HBS1LQ9Y450 684 aaKnown RBP28■■■□□ 2.07
CHFR-218ENST00000540963 KRT13P13646 458 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 HLA-EP13747 358 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 GTF2H1P32780 548 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 MCCD1P59942 119 aaPredicted RBP27.99■■■□□ 2.07
CHFR-218ENST00000540963 FNDC3BQ53EP0 1204 aaKnown RBP27.99■■■□□ 2.07
CHFR-218ENST00000540963 ANKRD52Q8NB46 1076 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 TMEM176AQ96HP8 235 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 IRX2Q9BZI1 471 aaPredicted RBP27.99■■■□□ 2.07
CHFR-218ENST00000540963 TMEM8AQ9HCN3 771 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 USP25Q9UHP3 1055 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 SLCO1B1Q9Y6L6 691 aa27.99■■■□□ 2.07
CHFR-218ENST00000540963 ZBED1O96006 694 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 DNTTP04053 509 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 NR2F2P24468 414 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 TTC31Q49AM3 519 aaPredicted RBP27.98■■■□□ 2.07
CHFR-218ENST00000540963 ZNF394Q53GI3 561 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 FOXD4L5Q5VV16 416 aaPredicted RBP27.98■■■□□ 2.07
CHFR-218ENST00000540963 AHI1Q8N157 1196 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 FOXD4L4Q8WXT5 416 aaPredicted RBP27.98■■■□□ 2.07
CHFR-218ENST00000540963 ARID3AQ99856 593 aa27.98■■■□□ 2.07
CHFR-218ENST00000540963 TP53BP1Q12888 1972 aaPredicted RBP27.98■■■□□ 2.07
CHFR-218ENST00000540963 EIF4E1BA6NMX2 242 aaKnown RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 GOLGA8CPA6NN73 597 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 ATP5BP06576 529 aaKnown RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 TRIM49P0CI25 452 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 TRIM49CP0CI26 452 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 RPL13P26373 211 aaKnown RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 CTSKP43235 329 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 TKTL1P51854 596 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 BCAT1P54687 386 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 RPS14P62263 151 aaKnown RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 PKP1Q13835 747 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 ADGRF1Q5T601 910 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 CHST9Q7L1S5 443 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 ADIPOR2Q86V24 386 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 TMPRSS12Q86WS5 348 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 SLC4A11Q8NBS3 891 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 TMA16Q96EY4 203 aaKnown RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 BBC3Q96PG8 261 aaPredicted RBP27.97■■■□□ 2.07
CHFR-218ENST00000540963 PRSS16Q9NQE7 514 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 CFAP45Q9UL16 551 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 SCML1Q9UN30 329 aa27.97■■■□□ 2.07
CHFR-218ENST00000540963 DLDP09622 509 aaKnown RBP27.96■■■□□ 2.07
CHFR-218ENST00000540963 CDK4P11802 303 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 PSMC2P35998 433 aaKnown RBP27.96■■■□□ 2.07
CHFR-218ENST00000540963 RAD23BP54727 409 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 MPP7Q5T2T1 576 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 KRT39Q6A163 491 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 FAM186BQ8IYM0 893 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 ZNF557Q8N988 423 aaPredicted RBP27.96■■■□□ 2.07
CHFR-218ENST00000540963 CISHQ9NSE2 258 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 SUN2Q9UH99 717 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 GGA2Q9UJY4 613 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 PCDHGA1Q9Y5H4 931 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 ASXL3Q9C0F0 2248 aa27.96■■■□□ 2.07
CHFR-218ENST00000540963 H0Y8X5 98 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 PABPC1P11940 636 aaKnown RBP27.95■■■□□ 2.06
CHFR-218ENST00000540963 USP30Q70CQ3 517 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 BHLHA9Q7RTU4 235 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 FMNL3Q8IVF7 1028 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 CYB5D2Q8WUJ1 264 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 ABCB8Q9NUT2 735 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 FTSJ1Q9UET6 329 aa27.95■■■□□ 2.06
CHFR-218ENST00000540963 VILLO15195 856 aa27.94■■■□□ 2.06
CHFR-218ENST00000540963 RACK1P63244 317 aaKnown RBP27.94■■■□□ 2.06
CHFR-218ENST00000540963 ZNF776Q68DI1 518 aaPredicted RBP27.94■■■□□ 2.06
CHFR-218ENST00000540963 ADAT2Q7Z6V5 191 aaKnown RBP27.94■■■□□ 2.06
CHFR-218ENST00000540963 RNF139Q8WU17 664 aa27.94■■■□□ 2.06
CHFR-218ENST00000540963 ORAI3Q9BRQ5 295 aa27.94■■■□□ 2.06
CHFR-218ENST00000540963 ULBP1Q9BZM6 244 aa27.94■■■□□ 2.06
CHFR-218ENST00000540963 XPO1O14980 1071 aaKnown RBP27.93■■■□□ 2.06
CHFR-218ENST00000540963 FSBPO95073 299 aa27.93■■■□□ 2.06
CHFR-218ENST00000540963 ZSCAN22P10073 491 aaPredicted RBP27.93■■■□□ 2.06
CHFR-218ENST00000540963 SFSWAPQ12872 951 aaKnown RBP27.93■■■□□ 2.06
CHFR-218ENST00000540963 MBLAC2Q68D91 279 aa27.93■■■□□ 2.06
CHFR-218ENST00000540963 CCDC47Q96A33 483 aaKnown RBP27.93■■■□□ 2.06
CHFR-218ENST00000540963 SKA1Q96BD8 255 aa27.93■■■□□ 2.06
CHFR-218ENST00000540963 ACE2Q9BYF1 805 aaPredicted RBP27.93■■■□□ 2.06
CHFR-218ENST00000540963 RCOR1Q9UKL0 485 aa27.93■■■□□ 2.06
CHFR-218ENST00000540963 NCKAP1Q9Y2A7 1128 aa27.93■■■□□ 2.06
CHFR-218ENST00000540963 SHROOM3Q8TF72 1996 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 A0A1B0GTQ1 180 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 RHOBTB3O94955 611 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 F13A1P00488 732 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 FOXD4L6Q3SYB3 417 aaPredicted RBP27.92■■■□□ 2.06
CHFR-218ENST00000540963 KIAA0895LQ68EN5 471 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 FOXD4L3Q6VB84 417 aaPredicted RBP27.92■■■□□ 2.06
CHFR-218ENST00000540963 MARCH9Q86YJ5 346 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 SCML4Q8N228 414 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 ZNF366Q8N895 744 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 FBXL13Q8NEE6 735 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 RSPH9Q9H1X1 276 aaPredicted RBP27.92■■■□□ 2.06
CHFR-218ENST00000540963 LRRC4Q9HBW1 653 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 ABCC13Q9NSE7 274 aa27.92■■■□□ 2.06
CHFR-218ENST00000540963 PLXNA2O75051 1894 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 FAM149AA5PLN7 773 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 KCNK3O14649 394 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 IGHV4-34P06331 123 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms