RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 MYO16Q9Y6X6 1858 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 CEP192Q8TEP8 1941 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 WDR27A2RRH5 827 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 HEPACAM2A8MVW5 462 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 KRIT1O00522 736 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 PODXLO00592 558 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 OPHN1O60890 802 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 HUS1O60921 280 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ZNF623O75123 536 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 CILPO75339 1184 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ZNF189O75820 626 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 PROSCO94903 275 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 EDN1P05305 212 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ITGA4P13612 1032 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 CTNNA1P35221 906 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 PTGER3P43115 390 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 TAF6P49848 677 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 GSCP56915 257 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 COPS2P61201 443 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 NNTQ13423 1086 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 DHX34Q14147 1143 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 ZNF268Q14587 947 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 MESDQ14696 234 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ZBTB6Q15916 424 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 HADHQ16836 314 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 LONRF2Q1L5Z9 754 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 USP41Q3LFD5 358 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 SEZ6Q53EL9 994 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 PLEKHA7Q6IQ23 1121 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 DNAJC24Q6P3W2 148 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 FUT10Q6P4F1 479 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 EMBQ6PCB8 327 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 DCUN1D2Q6PH85 259 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ALKAL1Q6UXT8 129 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 MON1BQ7L1V2 547 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 PRICKLE2Q7Z3G6 844 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 TMC8Q8IU68 726 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 MFSD6LQ8IWD5 586 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 FNIP1Q8TF40 1166 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 RBM41Q96IZ5 413 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 HEXIM2Q96MH2 286 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 UROC1Q96N76 676 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 LRRC3BQ96PB8 259 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ZSWIM1Q9BR11 485 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 FRMD8P1Q9BZ68 369 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 TPSD1Q9BZJ3 242 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 TSPYL1Q9H0U9 437 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 SNX25Q9H3E2 840 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 C8orf33Q9H7E9 229 aaPredicted RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 VIPAS39Q9H9C1 493 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
CHD4-208ENST00000540960 OGFRQ9NZT2 677 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 STIM2Q9P246 746 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 PARP2Q9UGN5 583 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 ANAPC7Q9UJX3 599 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 TFR2Q9UP52 801 aa8.74□□□□□ -1.01
CHD4-208ENST00000540960 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 MOSPD3O75425 235 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 RECQL4O94761 1208 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 ERBB2P04626 1255 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 POU2F2P09086 479 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 RHOXF2BP0C7M4 288 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 GJA1P17302 382 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 CD58P19256 250 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 LRPAP1P30533 357 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 CHRNA3P32297 505 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 SCNN1AP37088 669 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 ACADSBP45954 432 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 CXADRP78310 365 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 DSC1Q08554 894 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 HSP90B2PQ58FF3 399 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 SPOPLQ6IQ16 392 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 FSTL4Q6MZW2 842 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 SLC23A3Q6PIS1 610 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 LCLAT1Q6UWP7 414 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 RALGPS2Q86X27 583 aaPredicted RBP8.73□□□□□ -1.01
CHD4-208ENST00000540960 RCOR2Q8IZ40 523 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 TMEM86AQ8N2M4 240 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 MINDY1Q8N5J2 469 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 TOP6BLQ8N6T0 577 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 FRMD1Q8N878 549 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 C3orf20Q8ND61 904 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 C1orf131Q8NDD1 294 aaKnown RBP8.73□□□□□ -1.01
CHD4-208ENST00000540960 APPL2Q8NEU8 664 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 CCHCR1Q8TD31 782 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 GRK7Q8WTQ7 553 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 COG1Q8WTW3 980 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 TSC1Q92574 1164 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 SMARCD2Q92925 531 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 C18orf8Q96DM3 657 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 CYFIP2Q96F07 1278 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 RHOXF2Q9BQY4 288 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 APOL6Q9BWW8 343 aa8.73□□□□□ -1.01
CHD4-208ENST00000540960 RSAD1Q9HA92 442 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms