RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDCA3-208ENST00000540683 TMEM110Q86TL2 294 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 SCUBE3Q8IX30 993 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 HDDC3Q8N4P3 179 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDCA3-208ENST00000540683 C1orf131Q8NDD1 294 aaKnown RBP10.8□□□□□ -0.68
CDCA3-208ENST00000540683 SHC3Q92529 594 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 SIPA1Q96FS4 1042 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 PIWIL1Q96J94 861 aaKnown RBP10.8□□□□□ -0.68
CDCA3-208ENST00000540683 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 SLC32A1Q9H598 525 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 SFMBT1Q9UHJ3 866 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 TPX2Q9ULW0 747 aaKnown RBP10.8□□□□□ -0.68
CDCA3-208ENST00000540683 NUP205Q92621 2012 aa10.8□□□□□ -0.68
CDCA3-208ENST00000540683 DCHS1Q96JQ0 3298 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 A0A1W2PQF6 199 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 PRRT4C9JH25 899 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 DCLK1O15075 740 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 EPHX1P07099 455 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 DLDP09622 509 aaKnown RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 NDUFV2P19404 249 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 HOXD9P28356 352 aaPredicted RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 CD6P30203 668 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 CCR1P32246 355 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 PDCLQ13371 301 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 SF3A2Q15428 464 aaKnown RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 VWA3BQ502W6 1294 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 FNDC3BQ53EP0 1204 aaKnown RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 TRIM61Q5EBN2 209 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 PPM1JQ5JR12 505 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 PIK3R6Q5UE93 754 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 RNF219Q5W0B1 726 aaPredicted RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 SLC23A3Q6PIS1 610 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 BHLHA9Q7RTU4 235 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 MFN1Q8IWA4 741 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 RNF34Q969K3 372 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 WBP2Q969T9 261 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 PPP1R13BQ96KQ4 1090 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 MRGPRX1Q96LB2 322 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 TUBGCP2Q9BSJ2 902 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 CRACR2AQ9BSW2 395 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 LSM14BQ9BX40 385 aaKnown RBP10.79□□□□□ -0.68
CDCA3-208ENST00000540683 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 NDST4Q9H3R1 872 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 CACNA2D2Q9NY47 1150 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 GGA2Q9UJY4 613 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
CDCA3-208ENST00000540683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 MEI4A8MW99 385 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 F5H5T6 163 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 MBD3O95983 291 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 F9P00740 461 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SERPINF2P08697 491 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 PABPC1P11940 636 aaKnown RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 DESP17661 470 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 PON1P27169 355 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SCNN1AP37088 669 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 ZNF33AQ06730 810 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SLC14A1Q13336 389 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 ZNF234Q14588 700 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 GEN1Q17RS7 908 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 PEAR1Q5VY43 1037 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 C11orf57Q6ZUT1 292 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 TMPRSS6Q8IU80 811 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 TMEFF1Q8IYR6 380 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 RGL4Q8IZJ4 473 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 TMEM35BQ8NCS4 154 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 OR2T3Q8NH03 318 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 FIBINQ8TAL6 211 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 DQX1Q8TE96 717 aaKnown RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SKA1Q96BD8 255 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 FAM204AQ9H8W3 233 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 ITM2CQ9NQX7 267 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 KIAA1522Q9P206 1035 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-208ENST00000540683 PILRBQ9UKJ0 227 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 STAP1Q9ULZ2 295 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 INVSQ9Y283 1065 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 NCKAP1Q9Y2A7 1128 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 SDK1Q7Z5N4 2213 aa10.78□□□□□ -0.68
CDCA3-208ENST00000540683 IGHV1OR15-9A0A0B4J2B8 117 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 LNP1A1A4G5 178 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 DCDC2BA2VCK2 349 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 KCNJ18B7U540 433 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 E5RJQ4 531 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 H0Y626 953 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 MSI1O43347 362 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 TSPAN3O60637 253 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 TBL1XO60907 577 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 LSM8O95777 96 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms