RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 FUT11Q495W5 492 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 DAB2IPQ5VWQ8 1189 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 PEAR1Q5VY43 1037 aaPredicted RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 MSANTD2Q6P1R3 559 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 SERPINA13PQ6UXR4 307 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 CHST9Q7L1S5 443 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TMPRSS6Q8IU80 811 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 IRF2BP1Q8IU81 584 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 STK32AQ8WU08 396 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 PRCCQ92733 491 aaPredicted RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 SERPINB11Q96P15 392 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TUBGCP2Q9BSJ2 902 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 EDEM2Q9BV94 578 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TRIM62Q9BVG3 475 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 THAP9Q9H5L6 903 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TMEM74BQ9NUR3 256 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 ABCB8Q9NUT2 735 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 DNAJC12Q9UKB3 198 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TLR6Q9Y2C9 796 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 IGHV1OR15-9A0A0B4J2B8 117 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 GTPBP10A4D1E9 387 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 BECN2A8MW95 431 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 E5RJQ4 531 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 FOXN3O00409 490 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 CDX4O14627 284 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 IRAK2O43187 625 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 MOCS2O96007 188 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 IGLV3-27P01718 113 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 FYNP06241 537 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 ATP5BP06576 529 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 POLR2EP19388 210 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 PMLP29590 882 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 HLA-FP30511 346 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SLC6A4P31645 630 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 RPL34P49207 117 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 SGSHP51688 502 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 ATXN3P54252 364 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 SNX16P57768 344 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 RING1Q06587 406 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 LMAN2Q12907 356 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 VWA3BQ502W6 1294 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 FNDC3BQ53EP0 1204 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 EFHC1Q5JVL4 640 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 N4BP2L1Q5TBK1 243 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 PIK3R6Q5UE93 754 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 TMEM215Q68D42 235 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 TMEM110Q86TL2 294 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 PASD1Q8IV76 773 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 MFN1Q8IWA4 741 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 AHI1Q8N157 1196 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 CFAP52Q8N1V2 620 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 CARNMT1Q8N4J0 409 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 WFIKKN2Q8TEU8 576 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 CYB5D2Q8WUJ1 264 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 RNF34Q969K3 372 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 AZIN2Q96A70 460 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SIPA1Q96FS4 1042 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 PPP1R13BQ96KQ4 1090 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 NOX5Q96PH1 765 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 NDST4Q9H3R1 872 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SYNCQ9H7C4 482 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 POPDC2Q9HBU9 364 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 TMEM9BQ9NQ34 198 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 ITM2CQ9NQX7 267 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 EVLQ9UI08 416 aaPredicted RBP9.36□□□□□ -0.91
LMO3-222ENST00000540445 GGA2Q9UJY4 613 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 PILRBQ9UKJ0 227 aa9.36□□□□□ -0.91
LMO3-222ENST00000540445 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 ATXN2Q99700 1313 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 KCNJ18B7U540 433 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 H0Y626 953 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 PAPSS1O43252 624 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 GRAP2O75791 330 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 KCNK5O95279 499 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 TRUB2O95900 331 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 APOEP02649 317 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 PABPC1P11940 636 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 HLA-EP13747 358 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 PRKCHP24723 683 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 CD6P30203 668 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 MAPK8P45983 427 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 BPIFB4P59827 614 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 GFPT1Q06210 699 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 PDCLQ13371 301 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 ENPP2Q13822 863 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms