RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 SIX6OS1Q8N1H7 587 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 SCML4Q8N228 414 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 STK32AQ8WU08 396 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 PIGKQ92643 395 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 TPSD1Q9BZJ3 242 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 THG1LQ9NWX6 298 aaKnown RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 MBD1Q9UIS9 605 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 SLC12A8A0AV02 714 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PYCARD-AS1I3L0S3 204 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 MED7O43513 233 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 GRAP2O75791 330 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 LTFP02788 710 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
TMEM258-205ENST00000540434 IFNAR2P48551 515 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 DHPSP49366 369 aaPredicted RBP11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PSEN1P49768 467 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 ARID5AQ03989 594 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 GRSF1Q12849 480 aaKnown RBP eCLIP11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PDGFRLQ15198 375 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 LY6G5CQ5SRR4 150 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 FAM183BPQ6ZVS7 135 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 CYP2U1Q7Z449 544 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 IRF2BP2Q7Z5L9 587 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PHLDB2Q86SQ0 1253 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 FMNL3Q8IVF7 1028 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 RNF214Q8ND24 703 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 CPA5Q8WXQ8 436 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 TTYH3Q9C0H2 523 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 NACA2Q9H009 215 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 MARCH2Q9P0N8 246 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 IFNKQ9P0W0 207 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 CALCOCO1Q9P1Z2 691 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
TMEM258-205ENST00000540434 PTPRBP23467 1997 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 SERPINC1P01008 464 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TPM2P07951 284 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
TMEM258-205ENST00000540434 RALAP11233 206 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
TMEM258-205ENST00000540434 KRT9P35527 623 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 PDE6CP51160 858 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 DGKEP52429 567 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 NOMO3P69849 1222 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 MEA1Q16626 185 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TRNP1Q6NT89 227 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 ZNF605Q86T29 641 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 GAS2L3Q86XJ1 694 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 MARCH9Q86YJ5 346 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 NAT16Q8N8M0 369 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 ANKRD20A12PQ8NF67 263 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 OR2I1PQ8NGU4 316 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 SLC30A5Q8TAD4 765 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 IRGQQ8WZA9 623 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 MYEOVQ96EZ4 313 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 SYT11Q9BT88 431 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TSPY26PQ9H489 355 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 ABCC13Q9NSE7 274 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 TMEM74BQ9NUR3 256 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 AGO1Q9UL18 857 aaKnown RBP11.89□□□□□ -0.51
TMEM258-205ENST00000540434 HCN2Q9UL51 889 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 CLEC4EQ9ULY5 219 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
TMEM258-205ENST00000540434 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 GOLGA6L7A0A1B0GV03 622 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 GJB6O95452 261 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 APBB3O95704 486 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 ENGP17813 658 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 CORO1AP31146 461 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 STAT1P42224 750 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 SGSHP51688 502 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 BPIFB4P59827 614 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 CDR2Q01850 454 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 SEMA3BQ13214 749 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 EIF4EBP2Q13542 120 aaPredicted RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 TRIP4Q15650 581 aaPredicted RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 RAB6CQ53S08 254 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 OTUD1Q5VV17 481 aaPredicted RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 NAA35Q5VZE5 725 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 MSANTD2Q6P1R3 559 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 DENND1CQ8IV53 801 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms