RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CCDC70Q6NSX1 233 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 GRASPQ7Z6J2 395 aaPredicted RBP16.71■□□□□ 0.27
TRAF3-204ENST00000539721 C12orf76Q8N812 135 aaPredicted RBP16.71■□□□□ 0.27
TRAF3-204ENST00000539721 TTC13Q8NBP0 860 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 SHKBP1Q8TBC3 707 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 SMG7Q92540 1137 aaKnown RBP16.71■□□□□ 0.27
TRAF3-204ENST00000539721 SLC22A12Q96S37 553 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 KLF16Q9BXK1 252 aaPredicted RBP16.71■□□□□ 0.27
TRAF3-204ENST00000539721 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 HS3ST4Q9Y661 456 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 NOTCH4Q99466 2003 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 TRAV19A0A0A6YYK7 116 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 APOC4-APOC2K7ER74 178 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 NRG2O14511 850 aaPredicted RBP16.7■□□□□ 0.26
TRAF3-204ENST00000539721 CTIFO43310 598 aaKnown RBP16.7■□□□□ 0.26
TRAF3-204ENST00000539721 LRIG2O94898 1065 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 OLFM2O95897 454 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 APOC2P02655 101 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 IRF1P10914 325 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 ZFXP17010 805 aaPredicted RBP16.7■□□□□ 0.26
TRAF3-204ENST00000539721 TGM2P21980 687 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 HCAR3P49019 387 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 HARS2P49590 506 aaKnown RBP16.7■□□□□ 0.26
TRAF3-204ENST00000539721 NTHL1P78549 312 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 MTA1Q13330 715 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 SNX1Q13596 522 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 TCEAL5Q5H9L2 206 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 PIK3R6Q5UE93 754 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 SLITRK6Q9H5Y7 841 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 ARHGEF4Q9NR80 690 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 GKN1Q9NS71 199 aa16.7■□□□□ 0.26
TRAF3-204ENST00000539721 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
TRAF3-204ENST00000539721 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 STC2O76061 302 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CKMP06732 381 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 UQCRHP07919 91 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 RHOXF2BP0C7M4 288 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 SRGAP2BP0DMP2 458 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PFKLP17858 780 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 COILP38432 576 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 MLLT6P55198 1093 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 OTUD4Q01804 1114 aaKnown RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 HYAL1Q12794 435 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 DPYSQ14117 519 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CCNG2Q16589 344 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 MS4A13Q5J8X5 152 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 STXBP5Q5T5C0 1151 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 C1orf228Q6PIY5 440 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CCDC137Q6PK04 289 aaKnown RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 NPNTQ6UXI9 565 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 TMC5Q6UXY8 1006 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PLD5Q8N7P1 536 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CCDC26Q8TAB7 109 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 ACTL9Q8TC94 416 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 C1orf74Q96LT6 269 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 RHOXF2Q9BQY4 288 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PRDM16Q9HAZ2 1276 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 STIM2Q9P246 746 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 SAE1Q9UBE0 346 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 COLQQ9Y215 455 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CPQQ9Y646 472 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 C2orf16Q68DN1 1984 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 E9PAM4 449 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 MOSPD3O75425 235 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PECAM1P16284 738 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 DDX6P26196 483 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 EPHB2P29323 1055 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 HTR7P34969 479 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 FNTAP49354 379 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 TERF1P54274 439 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 NRG1Q02297 640 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 NAA30Q147X3 362 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 TEAD2Q15562 447 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 SLC5A9Q2M3M2 681 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 NCBP2-AS2Q69YL0 99 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 TTC27Q6P3X3 843 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 P3H4Q92791 437 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 TBC1D31Q96DN5 1066 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 ZFRQ96KR1 1074 aaKnown RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 RUNDC3BQ96NL0 473 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 FRMD8P1Q9BZ68 369 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-204ENST00000539721 ETNK2Q9NVF9 386 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 AMACRQ9UHK6 382 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 HEY1Q9Y5J3 304 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 CLUHO75153 1309 aa16.69■□□□□ 0.26
TRAF3-204ENST00000539721 ZNF197O14709 1029 aa16.68■□□□□ 0.26
TRAF3-204ENST00000539721 RAD51CO43502 376 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms