RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 BAP1Q92560 729 aa15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 ELF4Q99607 663 aaPredicted RBP15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 C7orf25Q9BPX7 421 aa15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 CUEDC2Q9H467 287 aa15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 SGK2Q9HBY8 427 aa15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
CCDC144NL-202ENST00000539177 KALRNO60229 2985 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 CAPN9O14815 690 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 VILLO15195 856 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 WNT1P04628 370 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 SYT1P21579 422 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 RACK1P63244 317 aaKnown RBP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 CXADRP78310 365 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 SHBQ15464 509 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 ZNF776Q68DI1 518 aaPredicted RBP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 CNNM4Q6P4Q7 775 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 FAM217AQ8IXS0 508 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 WFIKKN2Q8TEU8 576 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 TAF4BQ92750 862 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 PLD4Q96BZ4 506 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 DUSP16Q9BY84 665 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 AASDHPPTQ9NRN7 309 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 SERGEFQ9UGK8 458 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 GGA2Q9UJY4 613 aa15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 ARID1BQ8NFD5 2236 aaPredicted RBP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 TDRD6O60522 2096 aaKnown RBP15.28■□□□□ 0.04
CCDC144NL-202ENST00000539177 A0A1W2PPC4 97 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 DFNA5O60443 496 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 BRINP1O60477 761 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 PABPC1P11940 636 aaKnown RBP15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 AFMP43652 599 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 SGSHP51688 502 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 CFHR1Q03591 330 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 ZBTB16Q05516 673 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 MBLAC2Q68D91 279 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 PCSK4Q6UW60 755 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 ADIPOR2Q86V24 386 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 AHI1Q8N157 1196 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 IQUBQ8NA54 791 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 SNIP1Q8TAD8 396 aaKnown RBP15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 WFDC5Q8TCV5 224 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 NDRG1Q92597 394 aaKnown RBP15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 NRSN2Q9GZP1 204 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 MMRN2Q9H8L6 949 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 FBRSQ9HAH7 460 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 EBF2Q9HAK2 575 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 NCKAP1Q9Y2A7 1128 aa15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
CCDC144NL-202ENST00000539177 ZNF462Q96JM2 2506 aa15.27■□□□□ 0.03
CCDC144NL-202ENST00000539177 TENM4Q6N022 2769 aa15.27■□□□□ 0.03
CCDC144NL-202ENST00000539177 TEX51A0A1B0GUA7 166 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 A0A1W2PP55 124 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 WNT9AO14904 365 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 NASPP49321 788 aaPredicted RBP15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 CUL4BQ13620 913 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 RTP5Q14D33 572 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 CEP135Q66GS9 1140 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 FMNL3Q8IVF7 1028 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 GRAMD1CQ8IYS0 662 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 LSM14AQ8ND56 463 aaKnown RBP15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 SAP25Q8TEE9 199 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 IMPG2Q9BZV3 1241 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 PABPC3Q9H361 631 aaKnown RBP15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 DMAC2Q9NW81 257 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 FBXL12Q9NXK8 326 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
CCDC144NL-202ENST00000539177 PYCARD-AS1I3L0S3 204 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 J3QKU1 62 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 SPTLC2O15270 562 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 POLR2DO15514 142 aaKnown RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 NR3C1P04150 777 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 DLDP09622 509 aaKnown RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 EPHA8P29322 1005 aaPredicted RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 CD70P32970 193 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 HARS2P49590 506 aaKnown RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 GALCP54803 685 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 TLE3Q04726 772 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 BNIP3Q12983 259 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 CUL4AQ13619 759 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 TRIP4Q15650 581 aaPredicted RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 TAF1BQ53T94 588 aaPredicted RBP15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 SHC4Q6S5L8 630 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 PIGZQ86VD9 579 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 SPACA3Q8IXA5 215 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 ARHGAP18Q8N392 663 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 GOLGA1Q92805 767 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 FGF11Q92914 225 aa15.25■□□□□ 0.03
CCDC144NL-202ENST00000539177 SKA1Q96BD8 255 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms