RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CPQQ9Y646 472 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 ZNF318Q5VUA4 2279 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 EEF2KO00418 725 aaKnown RBP14.64□□□□□ -0.07
CD4-208ENST00000538827 PAGE1O75459 146 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 KRT10P13645 584 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 HDCP19113 662 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 DDX6P26196 483 aaKnown RBP eCLIP14.64□□□□□ -0.07
CD4-208ENST00000538827 CDKN2BP42772 138 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 EPHA5P54756 1037 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 TPI1P60174 286 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 COPS2P61201 443 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 SCAPQ12770 1279 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 KCNC3Q14003 757 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 DPYSL3Q14195 570 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 PPP2R5EQ16537 467 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 DPYSL2Q16555 572 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 TFDP3Q5H9I0 405 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 NUGGCQ68CJ6 796 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 KLHDC10Q6PID8 442 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 ANKS1BQ7Z6G8 1248 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 ZNF276Q8N554 614 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 CEP112Q8N8E3 955 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 HAUS1Q96CS2 278 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 SLC39A13Q96H72 371 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 SLC22A12Q96S37 553 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
CD4-208ENST00000538827 PRRX2Q99811 253 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 EPAS1Q99814 870 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 MAGEB5Q9BZ81 275 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 L2HGDHQ9H9P8 463 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.64□□□□□ -0.07
CD4-208ENST00000538827 CLDND1Q9NY35 253 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
CD4-208ENST00000538827 XPO7Q9UIA9 1087 aaKnown RBP14.64□□□□□ -0.07
CD4-208ENST00000538827 GOLGA6L10A0A0M3HER8 536 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 CTAGE15A4D2H0 777 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 C3orf70A6NLC5 250 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 PDE2AO00408 941 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 ZNF197O14709 1029 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 RIOK3O14730 519 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 CTAGE8P0CG41 777 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 GOT1P17174 413 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 CORO1AP31146 461 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 L1CAMP32004 1257 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 ARSEP51690 589 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 PTPN5P54829 565 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 COG7P83436 770 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 RING1Q06587 406 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 EIF4EBP2Q13542 120 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 CLUL1Q15846 466 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 PRSS36Q5K4E3 855 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 RAP1GAP2Q684P5 730 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 PTCRAQ6ISU1 281 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 GET4Q7L5D6 327 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 CTAGE6Q86UF2 777 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 CHSY1Q86X52 802 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 PSTKQ8IV42 348 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 CTAGE4Q8IX94 777 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 CYP2S1Q96SQ9 504 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 ZNF670Q9BS34 389 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 HERPUD2Q9BSE4 406 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 KLF16Q9BXK1 252 aaPredicted RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 AP1M1Q9BXS5 423 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 SMG9Q9H0W8 520 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 GKN1Q9NS71 199 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 TMEM51Q9NW97 253 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 RNF14Q9UBS8 474 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 CDH22Q9UJ99 828 aa14.63□□□□□ -0.07
CD4-208ENST00000538827 LSM7Q9UK45 103 aaKnown RBP14.63□□□□□ -0.07
CD4-208ENST00000538827 CFAP54Q96N23 3096 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 GRXCR2A6NFK2 248 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 I6L893 689 aaPredicted RBP14.62□□□□□ -0.07
CD4-208ENST00000538827 KRIT1O00522 736 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 SCAMP3O14828 347 aaKnown RBP14.62□□□□□ -0.07
CD4-208ENST00000538827 DAPK3O43293 454 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 TBX10O75333 385 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 MOSPD3O75425 235 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 STC2O76061 302 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 OLFM2O95897 454 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 IGLV3-27P01718 113 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 PTPN7P35236 360 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 AVPR1AP37288 418 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 HARS2P49590 506 aaKnown RBP14.62□□□□□ -0.07
CD4-208ENST00000538827 PIK3R6Q5UE93 754 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 RWDD4Q6NW29 188 aaKnown RBP14.62□□□□□ -0.07
CD4-208ENST00000538827 USP34Q70CQ2 3546 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 UNC45BQ8IWX7 931 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 ITFG1Q8TB96 612 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 MAIP1Q8WWC4 291 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 BTN2A3PQ96KV6 586 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 CSPG4P5Q96PW8 444 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 TASP1Q9H6P5 420 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 FAM50BQ9Y247 325 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 SH3BP1Q9Y3L3 701 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms