RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ERVK-10P10266 1014 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PSMB4P28070 264 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 BST2Q10589 180 aaKnown RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 C9orf57Q5W0N0 161 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TMPRSS6Q8IU80 811 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 KBTBD2Q8IY47 623 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 DEFB106AQ8N104 65 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 POU5F2Q8N7G0 328 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ANKRD27Q96NW4 1050 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PANX3Q96QZ0 392 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SYBUQ9NX95 663 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MKS1Q9NXB0 559 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PLA2G4CQ9UP65 541 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 DNAJC16Q9Y2G8 782 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 RNF103O00237 685 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 CLDN5O00501 218 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ADCY6O43306 1168 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 CREB3O43889 395 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 USP12O75317 370 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 DGKIO75912 1065 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 RECQL4O94761 1208 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ACADSP16219 412 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 DESP17661 470 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 IGFBP6P24592 240 aaPredicted RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MLH1P40692 756 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PEX19P40855 299 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 NR2C2P49116 596 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MXRA7P84157 204 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 KYAT1Q16773 422 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PACS1Q6VY07 963 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TTC39CQ8N584 583 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SPATA13Q96N96 652 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 BEST1O76090 585 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 PRKCGP05129 697 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 GSTA2P09210 222 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 C6orf222P0C671 652 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 FGF3P11487 239 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 GJA5P36382 358 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 ABCG1P45844 678 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 NDUFV1P49821 464 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SULT1E1P49888 294 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 CCNHP51946 323 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 NIPAL4Q0D2K0 466 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 VWA5B1Q5TIE3 1220 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 FAM91A1Q658Y4 838 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SMYD5Q6GMV2 418 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 MAVSQ7Z434 540 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SCUBE1Q8IWY4 988 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 YIPF3Q9GZM5 350 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 MMADHCQ9H3L0 296 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 PNPOQ9NVS9 261 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SLC7A8Q9UHI5 535 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SDR42E2A6NKP2 422 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 KCNK1O00180 336 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SORBS2O94875 1100 aaKnown RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 ACAT1P24752 427 aaKnown RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SERPINB9P50453 376 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 SLC25A3Q00325 362 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 ADIGQ0VDE8 80 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 ARHGAP17Q68EM7 881 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 CMC1Q7Z7K0 106 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 NT5DC4Q86YG4 428 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 C10orf107Q8IVU9 208 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 LMNTD2Q8IXW0 634 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 NME8Q8N427 588 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 AZIN2Q96A70 460 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 FAM136AQ96C01 138 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 AGAP3Q96P47 875 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
CPNE8-203ENST00000538596 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
CPNE8-203ENST00000538596 BRCA2P51587 3418 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 BIRC5O15392 142 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 USP1O94782 785 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 GCKP35557 465 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms