RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DKC1O60832 514 aaKnown RBP eCLIP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ITGBL1O95965 494 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ZBED1O96006 694 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CST3P01034 146 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 THRAP10827 490 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 RALBP11234 206 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 THOP1P52888 689 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 EPGNQ6UW88 154 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PACS1Q6VY07 963 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PATL1Q86TB9 770 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 GALNT4Q8N4A0 578 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF513Q8N8E2 541 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 KYQ8NBH2 561 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ATP6V0A1Q93050 837 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 COG4Q9H9E3 785 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PLGRKTQ9HBL7 147 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 COPG2Q9UBF2 871 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CDY1Q9Y6F8 540 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PRSS51A0A1B0GVH4 220 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 TPP1O14773 563 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 AIM2O14862 343 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 SUPT3HO75486 399 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 STBD1O95210 358 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 ZBTB7AO95365 584 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PIGRP01833 764 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 ALDH3B2P48448 385 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF423Q2M1K9 1284 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 BNC2Q6ZN30 1099 aaPredicted RBP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF534Q76KX8 674 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PODNQ7Z5L7 613 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 TRIML2Q8N7C3 387 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 SYTL5Q8TDW5 730 aaPredicted RBP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 LHX5Q9H2C1 402 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 TNS1Q9HBL0 1735 aaKnown RBP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 XRCC1P18887 633 aaPredicted RBP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 RBL1P28749 1068 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 NUMBP49757 651 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PHEXP78562 749 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PGM5Q15124 567 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PIGGQ5H8A4 983 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 LPCAT2Q7L5N7 544 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 XYLT1Q86Y38 959 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 CHERPQ8IWX8 916 aaKnown RBP19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 MPP5Q8N3R9 675 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 SLC7A3Q8WY07 619 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 PKP2Q99959 881 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 RRN3Q9NYV6 651 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 CYTH4Q9UIA0 394 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 SERPINA10Q9UK55 444 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 WDR37Q9Y2I8 494 aa19.1■□□□□ 0.65
SFSWAP-207ENST00000538548 MYCLP12524 364 aaPredicted RBP19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 AP3M2P53677 418 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 PDK1Q15118 436 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 INSCQ1MX18 579 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 RIN3Q8TB24 985 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 PEBP4Q96S96 227 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 CDRT15Q96T59 188 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 TDRD3Q9H7E2 651 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 WDR81Q562E7 1941 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 PRKCGP05129 697 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 DSELQ8IZU8 1212 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 PLD5Q8N7P1 536 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 TRPC4APQ8TEL6 797 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 RNF157Q96PX1 679 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 CDH19Q9H159 772 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 MAN1C1Q9NR34 630 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 ASNSD1Q9NWL6 643 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 TDRKHQ9Y2W6 561 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 PCDHB12Q9Y5F1 795 aa19.09■□□□□ 0.65
SFSWAP-207ENST00000538548 BCLAF3A2AJT9 711 aaKnown RBP19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 GPR25O00155 361 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 IDO1P14902 403 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 PORP16435 677 aaPredicted RBP19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 PTGER2P43116 358 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 MYL6P60660 151 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 CYTH1Q15438 398 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 BHLHE22Q8NFJ8 381 aaPredicted RBP19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 TAAR1Q96RJ0 339 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 CPXM1Q96SM3 734 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 GCOM2Q9BZD3 368 aaPredicted RBP19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF232Q9UNY5 417 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF711Q9Y462 761 aa19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 COL2A1P02458 1487 aaPredicted RBP19.08■□□□□ 0.65
SFSWAP-207ENST00000538548 A0A1B0GTW7 788 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 RGSL1A5PLK6 1076 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 H0YJX3 145 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 GLDCP23378 1020 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 NUP107P57740 925 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 TXNL4AP83876 142 aaKnown RBP19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC9B1Q4ZJI4 515 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 C4orf22Q6V702 233 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 ILDR2Q71H61 639 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF526Q8TF50 670 aaPredicted RBP19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 KCNN1Q92952 543 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 CNDP1Q96KN2 507 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 FERMT1Q9BQL6 677 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms