RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 CLEC11AQ9Y240 323 aa18.3■□□□□ 0.52
TRA2A-211ENST00000538367 RGSL1A5PLK6 1076 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 MAFGO15525 162 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 YBX3P16989 372 aaKnown RBP eCLIP18.29■□□□□ 0.521e-9■□□□□ 9.9
TRA2A-211ENST00000538367 GLDCP23378 1020 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 THOP1P52888 689 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 SLC5A3P53794 718 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 OGDHQ02218 1023 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 SEPT6Q14141 434 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PHTF2Q8N3S3 785 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 TMIGD2Q96BF3 282 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 C12orf43Q96C57 262 aaKnown RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 FAF2Q96CS3 445 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 CNDP2Q96KP4 475 aaKnown RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DDX4Q9NQI0 724 aaKnown RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 OLAHQ9NV23 265 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 HMX2A2RU54 273 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DCXO43602 365 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 LYPLA1O75608 230 aaPredicted RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 HLA-DRAP01903 254 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 CSH1P0DML2 217 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 CSH2P0DML3 217 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 ZNF132P52740 706 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 NDST2P52849 883 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PEX3P56589 373 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PCLAFQ15004 111 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PDK1Q15118 436 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DOK7Q18PE1 504 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DEPDC1Q5TB30 811 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DSELQ8IZU8 1212 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 SLC7A3Q8WY07 619 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 POMGNT1Q8WZA1 660 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 THAP11Q96EK4 314 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 DUS3LQ96G46 650 aaKnown RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 FERMT1Q9BQL6 677 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 LIN28AQ9H9Z2 209 aaKnown RBP18.29■□□□□ 0.52
TRA2A-211ENST00000538367 GID8Q9NWU2 228 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 HESX1Q9UBX0 185 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 CROTQ9UKG9 612 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 EMCNQ9ULC0 261 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 TRIM17Q9Y577 477 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 SLC30A1Q9Y6M5 507 aa18.29■□□□□ 0.52
TRA2A-211ENST00000538367 PSMD12O00232 456 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TBC1D12O60347 775 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 H2AFYO75367 372 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 SULT1C4O75897 302 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 FUCA1P04066 466 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CFHP08603 1231 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 DCKP27707 260 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CDH5P33151 784 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 NUDT2P50583 147 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 DYNLT1P63172 113 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 BMPR2Q13873 1038 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 IKBKEQ14164 716 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 PPP2R5DQ14738 602 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 NOMO1Q15155 1222 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CLVS1Q8IUQ0 354 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 GALNT4Q8N4A0 578 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 FIBCD1Q8N539 461 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 BHLHE22Q8NFJ8 381 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TBC1D15Q8TC07 691 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 PAIP1Q9H074 479 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 SMYD2Q9NRG4 433 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 PIM2Q9P1W9 311 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 SLC9A2Q9UBY0 812 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 LOC100653049A0A140TA62 436 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TMEM114B3SHH9 223 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CNOT3O75175 753 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TADA2AO75478 443 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 KRT34O76011 436 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 GSTT2P0CG29 244 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 GSTT2BP0CG30 244 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 XRCC1P18887 633 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 MAGEA3P43357 314 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 GTF2IP78347 998 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 THOC7Q6I9Y2 204 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 NIPA1Q7RTP0 329 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 COLGALT2Q8IYK4 626 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CPSF7Q8N684 471 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TMEM35BQ8NCS4 154 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TRUB1Q8WWH5 349 aaKnown RBP18.28■□□□□ 0.52
TRA2A-211ENST00000538367 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 CDH19Q9H159 772 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 PLAC1Q9HBJ0 212 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 TRPC7Q9HCX4 862 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 ATAD3AQ9NVI7 634 aa18.28■□□□□ 0.52
TRA2A-211ENST00000538367 SIPA1L1O43166 1804 aa18.27■□□□□ 0.52
TRA2A-211ENST00000538367 XPO1O14980 1071 aaKnown RBP18.27■□□□□ 0.52
TRA2A-211ENST00000538367 ZBTB14O43829 449 aa18.27■□□□□ 0.52
TRA2A-211ENST00000538367 MCF2P10911 925 aa18.27■□□□□ 0.52
TRA2A-211ENST00000538367 QARSP47897 775 aaKnown RBP18.27■□□□□ 0.52
TRA2A-211ENST00000538367 PSMD8P48556 350 aa18.27■□□□□ 0.52
TRA2A-211ENST00000538367 RPL10AP62906 217 aaKnown RBP18.27■□□□□ 0.52
TRA2A-211ENST00000538367 DMP1Q13316 513 aaPredicted RBP18.27■□□□□ 0.52
TRA2A-211ENST00000538367 INAQ16352 499 aa18.27■□□□□ 0.52
TRA2A-211ENST00000538367 N4BP2L1Q5TBK1 243 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms