RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SERPINA4P29622 427 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SEC13P55735 322 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CNTN1Q12860 1018 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 INSCQ1MX18 579 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SLC45A4Q5BKX6 768 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 NOL9Q5SY16 702 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 EEF1DP3Q658K8 133 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ANO5Q75V66 913 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SPATA21Q7Z572 469 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 TRIML2Q8N7C3 387 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 C12orf29Q8N999 325 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 TM6SF2Q9BZW4 377 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SOHLH2Q9NX45 425 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 AKAP7Q9P0M2 348 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 CTNNAL1Q9UBT7 734 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 FAF1Q9UNN5 650 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PLAGL2Q9UPG8 496 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 PHF20L1A8MW92 1017 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ANKRD65E5RJM6 399 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 OR56A5P0C7T3 313 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ARF4P18085 180 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PTPN3P26045 913 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 MGAT1P26572 445 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ALDH6A1Q02252 535 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PPP3CAQ08209 521 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 LBX2Q6XYB7 198 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 OTOAQ7RTW8 1153 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 UBE2Q2Q8WVN8 375 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CASKIN2Q8WXE0 1202 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 RUBCNQ92622 972 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 FAM111AQ96PZ2 611 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 NLNQ9BYT8 704 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 MANSC1Q9H8J5 431 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 C10orf88Q9H8K7 445 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 NDRG2Q9UN36 371 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 BAZ2BQ9UIF8 2168 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PEAK1Q9H792 1746 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 GTPBP10A4D1E9 387 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 FAM47E-STBD1D6RA91 191 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 KCNK1O00180 336 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 PPP1R11O60927 126 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 SEC24DO94855 1032 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 HSPA1AP0DMV8 641 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 HSPA1BP0DMV9 641 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 CCND3P30281 292 aaPredicted RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 MIPP30301 263 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 FMO4P31512 558 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 GRM5P41594 1212 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CCNG1P51959 295 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 POLR2LP62875 67 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 AP2B1P63010 937 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 GTF2BQ00403 316 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 GCNT1Q02742 428 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SLC29A2Q14542 456 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRP6-203ENST00000538239 RARS2Q5T160 578 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 CACHD1Q5VU97 1274 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 C9orf57Q5W0N0 161 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 RAET1GQ6H3X3 334 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 HORMAD1Q86X24 394 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CHPFQ8IZ52 775 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 VPS37AQ8NEZ2 397 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 HTR3CQ8WXA8 447 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 E2F7Q96AV8 911 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ACOX2Q99424 681 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZCCHC2Q9C0B9 1178 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 ISCUQ9H1K1 167 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 BPIFA1Q9NP55 256 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 THEGQ9P2T0 379 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CAPN6Q9Y6Q1 641 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ABCC6O95255 1503 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 GOLGA8TH3BQL2 631 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 HPGDP15428 266 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 HLA-DPA1P20036 260 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ST3GAL1Q11201 340 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 INPP5AQ14642 412 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 IL17AQ16552 155 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 NPNTQ6UXI9 565 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ABHD15Q6UXT9 468 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 FBXL16Q8N461 479 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 KAT5Q92993 513 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 TUBGCP3Q96CW5 907 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZNF333Q96JL9 665 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRP6-203ENST00000538239 YY1AP1Q9H869 796 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZFYVE1Q9HBF4 777 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 OR12D3Q9UGF7 316 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CDV3Q9UKY7 258 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 SNX5Q9Y5X3 404 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CDY1Q9Y6F8 540 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZMYM2Q9UBW7 1377 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SOWAHBA6NEL2 793 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 C1QTNF3-AMACRE9PGA6 284 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 RNF103O00237 685 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SNRPD1P62314 119 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PFKPQ01813 784 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 MAPK7Q13164 816 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 HIC1Q14526 733 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 DMC1Q14565 340 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ECM1Q16610 540 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms