RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SFXN1Q9H9B4 322 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 MTRRQ9UBK8 725 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 MYH10P35580 1976 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 UBA6A0AVT1 1052 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 PABPN1LA6NDY0 278 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 ANTXRLA6NF34 631 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 H3BRJ5 948 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 HGSO14964 777 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 UGT2B4P06133 528 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 RBP3P10745 1247 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 STK19P49842 368 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 ERVK-21P61565 698 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 IRX4P78413 519 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 DSG1Q02413 1049 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 POLD3Q15054 466 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 ATXN7L2Q5T6C5 722 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 GAREM2Q75VX8 874 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MAATS1Q7Z4T9 603 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FAM71DQ8N9W8 422 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MCUQ8NE86 351 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FGF14Q92915 247 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 TMEM175Q9BSA9 504 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 NFKBIZQ9BYH8 718 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 UNKQ9C0B0 810 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SLCO3A1Q9UIG8 710 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SIK3Q9Y2K2 1263 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FCF1Q9Y324 198 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 IKBKGQ9Y6K9 419 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 ZFP37Q9Y6Q3 630 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 IGF2RP11717 2491 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 P4HA2O15460 535 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 GAS8O95995 478 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CTAGE8P0CG41 777 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 TYRP14679 529 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 ITGB6P18564 788 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 C2orf54Q08AI8 447 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MRPL10Q7Z7H8 261 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CTAGE4Q8IX94 777 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FRMD1Q8N878 549 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SPATA20Q8TB22 786 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 KRT35Q92764 455 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SERPINB11Q96P15 392 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 WRAP53Q9BUR4 548 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 VPS37BQ9H9H4 285 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 RBM22Q9NW64 420 aaKnown RBP eCLIP7.47□□□□□ -1.21
MSH6-209ENST00000538136 CAPN6Q9Y6Q1 641 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 DICER1Q9UPY3 1922 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 LEFTY2O00292 366 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CD48P09326 243 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 HAPLN1P10915 354 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 ATF6P18850 670 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CHKAP35790 457 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MAPK8P45983 427 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 PSMD8P48556 350 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 VAV2P52735 878 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 PLTPP55058 493 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 AMPD2Q01433 879 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 CLEC16AQ2KHT3 1053 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FBXL19Q6PCT2 694 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SPOCD1Q6ZMY3 1216 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MYADMQ96S97 322 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 LGMNQ99538 433 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SLC6A17Q9H1V8 727 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 KCNK12Q9HB15 430 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 BPIFA1Q9NP55 256 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 TMEM30AQ9NV96 361 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MTMR10Q9NXD2 777 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SQORQ9Y6N5 450 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 POLEQ07864 2286 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FAM237AA0A1B0GTK4 181 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SNX2O60749 519 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 NOL4O94818 638 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 RARAP10276 462 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 TYMPP19971 482 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 AKT1P31749 480 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CCR2P41597 374 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 EIF3EP60228 445 aaKnown RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 FAM78AQ5JUQ0 283 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 RABGAP1LQ5R372 815 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 ARMC12Q5T9G4 340 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CES3Q6UWW8 571 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CHST9Q7L1S5 443 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 FAM71AQ8IYT1 594 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CCDC185Q8N715 623 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 ZNF513Q8N8E2 541 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 RFFLQ8WZ73 363 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CHFRQ96EP1 664 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CINPQ9BW66 212 aaPredicted RBP7.47□□□□□ -1.21
MSH6-209ENST00000538136 TASP1Q9H6P5 420 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 CIDEBQ9UHD4 219 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SNX24Q9Y343 169 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 SAR1BQ9Y6B6 198 aa7.47□□□□□ -1.21
MSH6-209ENST00000538136 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms