RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 CCDC106Q9BWC9 280 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SHCBP1LQ9BZQ2 653 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC17A7Q9P2U7 560 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 DNAJC12Q9UKB3 198 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ICMTO60725 284 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 KRT8P05787 483 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 RRM1P23921 792 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 AP3M2P53677 418 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 BNIP3Q12983 259 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 AGAP7PQ5VUJ5 663 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 GALNT18Q6P9A2 607 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ANKS1BQ7Z6G8 1248 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 NOP9Q86U38 636 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 LRRC15Q8TF66 581 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 CXorf21Q9HAI6 301 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDHGA11Q9Y5H2 935 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 A0A1W2PQ67 120 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 H3BNH8 94 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FSCN2O14926 492 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FGFR1P11362 822 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 AOC1P19801 751 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ETV3P41162 512 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 CLK3P49761 638 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 BMXP51813 675 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 PHC1P78364 1004 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FLOT2Q14254 428 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 STXBP2Q15833 593 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 USP43Q70EL4 1123 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 KBTBD6Q86V97 674 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FAR2Q96K12 515 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 COPEO14579 308 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ZBTB5O15062 677 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 GABBR2O75899 941 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FTLP02792 175 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 HMGCRP04035 888 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 CD300CQ08708 224 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 GRB10Q13322 594 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ORC2Q13416 577 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 UBAP2LQ14157 1087 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 LLGL1Q15334 1064 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 DGKDQ16760 1214 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 RNF111Q6ZNA4 994 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC51AQ86UW1 340 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 DLG3Q92796 817 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 E2F7Q96AV8 911 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF486Q96H40 463 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 APOPT1Q96IL0 206 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 COPS7BQ9H9Q2 264 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 STRIP2Q9ULQ0 834 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 ARHGAP26Q9UNA1 814 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 COG5Q9UP83 839 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 AFDNP55196 1824 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC15A5A6NIM6 579 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 PRELPP51888 382 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 CREB5Q02930 508 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 TROAPQ12815 778 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 EPHA7Q15375 998 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC15A4Q8N697 577 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 PCSK9Q8NBP7 692 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 KLF6Q99612 283 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 MROQ9BYG7 248 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 WDR12Q9GZL7 423 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 TAF1LQ8IZX4 1826 aa11.17□□□□□ -0.62
CLSTN3-207ENST00000537408 FAM170AA1A519 330 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 TSPAN1O60635 241 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CCND2P30279 289 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 OXA1LQ15070 435 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 RALGPS1Q5JS13 557 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 PERM1Q5SV97 790 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 GPR107Q5VW38 600 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 TTC33Q6PID6 262 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 HPS6Q86YV9 775 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 BANPQ8N9N5 519 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 GLIS3Q8NEA6 775 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ATG4AQ8WYN0 398 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CPQQ9Y646 472 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 KLF11O14901 512 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms