RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NUMA1Q14980 2115 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TMEM8BA6NDV4 472 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 METTL12A8MUP2 240 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 H0Y626 953 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PMM2O15305 246 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MSI1O43347 362 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GJB3O75712 270 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TRIM16O95361 564 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 BECN1Q14457 450 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 DCAF12L1Q5VU92 463 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CHST9Q7L1S5 443 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CACUL1Q86Y37 369 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 OR2T3Q8NH03 318 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 SLC35F5Q8WV83 523 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TFAP2BQ92481 460 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MIR1-1HGQ9H1L0 117 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PLA2G4CQ9UP65 541 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PCDHB4Q9Y5E5 795 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CABIN1Q9Y6J0 2220 aa20.51■□□□□ 0.87
TNFRSF1B-204ENST00000536782 NBEAQ8NFP9 2946 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 HLA-EP13747 358 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 RGS7P49802 495 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 FAM193AP78312 1265 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CETN1Q12798 172 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GRIK2Q13002 908 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CAMK2GQ13555 558 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 STILQ15468 1287 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CNGA2Q16280 664 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 FNDC3BQ53EP0 1204 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PMF1Q6P1K2 205 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MSANTD2Q6P1R3 559 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PPM1KQ8N3J5 372 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ZCCHC9Q8N567 271 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 IRGQQ8WZA9 623 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ABCB8Q9NUT2 735 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.5■□□□□ 0.87
TNFRSF1B-204ENST00000536782 M0QYV0 167 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 SH3BP5O60239 455 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PPP1R2P41236 205 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 NUGGCQ68CJ6 796 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ISM2Q6H9L7 571 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 KIAA0907Q7Z7F0 614 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ADIPOR2Q86V24 386 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 FAM124AQ86V42 546 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 AHI1Q8N157 1196 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CYB5D2Q8WUJ1 264 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GOLGA1Q92805 767 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 IRX2Q9BZI1 471 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TMEM245Q9H330 911 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 KLK13Q9UKR3 277 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MSRB2Q9Y3D2 182 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PCDHB9Q9Y5E1 797 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 BAHCC1Q9P281 2608 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PLXNB3Q9ULL4 1909 aa20.49■□□□□ 0.87
TNFRSF1B-204ENST00000536782 RNF225M0QZC1 329 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PIK3R2O00459 728 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 BCAT2O15382 392 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 P4HA2O15460 535 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GABBR2O75899 941 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PABPC1P11940 636 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CD44P16070 742 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 SLC11A2P49281 568 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TRIP6Q15654 476 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ZNF423Q2M1K9 1284 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MPP7Q5T2T1 576 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 HSFY1Q96LI6 401 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CAMK1GQ96NX5 476 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ZSWIM1Q9BR11 485 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PCED1AQ9H1Q7 454 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 LHX5Q9H2C1 402 aa20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 EIF2B4Q9UI10 523 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-204ENST00000536782 IRAK2O43187 625 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 FBXO21O94952 628 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 IGLV3-27P01718 113 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 LTFP02788 710 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ATP5BP06576 529 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 BRD2P25440 801 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 SGSHP51688 502 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TBX4P57082 545 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 NUCB2P80303 420 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 RING1Q06587 406 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PTPRNQ16849 979 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PIK3R6Q5UE93 754 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MBLAC2Q68D91 279 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 RFWD3Q6PCD5 774 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 NAXDQ8IW45 347 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ELOA2Q8IYF1 753 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ZNF366Q8N895 744 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ZNF557Q8N988 423 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 LMO3Q8TAP4 145 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 KAT5Q92993 513 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 FBRSQ9HAH7 460 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 MAN1B1Q9UKM7 699 aa20.47■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ITPR1Q14643 2758 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms