RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 GOLGA8SH3BPF8 625 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 TBL1XO60907 577 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 DGKEP52429 567 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 NME3Q13232 169 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 EOGTQ5NDL2 527 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 FAM102AQ5T9C2 384 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-206ENST00000536429 RAP1GAP2Q684P5 730 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 MMS22LQ6ZRQ5 1243 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 ZNF677Q86XU0 584 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 CFAP52Q8N1V2 620 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 OLIG1Q8TAK6 271 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 AZIN2Q96A70 460 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 CD248Q9HCU0 757 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 ANLNQ9NQW6 1124 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 STIM2Q9P246 746 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 EBF1Q9UH73 591 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 RAD54BQ9Y620 910 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 DNAH14Q0VDD8 3507 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 TCRBV21S2A2A0A5A6 115 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 KCNU1A8MYU2 1149 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 I6L893 689 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 RPP40O75818 363 aaKnown RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 GJB6O95452 261 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 APOEP02649 317 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 UNGP13051 313 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 HOXB2P14652 356 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 PTMSP20962 102 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 MMP8P22894 467 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 NTSR1P30989 418 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 CD70P32970 193 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 NOS2P35228 1153 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 FLT3P36888 993 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 GGCXP38435 758 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 MATKP42679 507 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 IL12RB1P42701 662 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 PTP4A2Q12974 167 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 MS4A13Q5J8X5 152 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 CEP68Q76N32 757 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 CHPFQ8IZ52 775 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 GAB3Q8WWW8 586 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 NPY6RQ99463 290 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 HINFPQ9BQA5 517 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 PIGVQ9NUD9 493 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 ABCB8Q9NUT2 735 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 ELOVL2Q9NXB9 296 aa13.65□□□□□ -0.22
PRKDC-206ENST00000536429 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
PRKDC-206ENST00000536429 M0QYT0 321 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 SERPINC1P01008 464 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 TACR2P21452 398 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CNR2P34972 360 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 IRAK1P51617 712 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 SNX16P57768 344 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 ZNF445P59923 1031 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 FANCCQ00597 558 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 NR1I3Q14994 352 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CLEC16AQ2KHT3 1053 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 RAB6CQ53S08 254 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 IRF2BP2Q7Z5L9 587 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
PRKDC-206ENST00000536429 LGI2Q8N0V4 545 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 FAM160A2Q8N612 972 aaPredicted RBP13.64□□□□□ -0.23
PRKDC-206ENST00000536429 EMC1Q8N766 993 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 FRMD1Q8N878 549 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CYB5D2Q8WUJ1 264 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 HMGB4Q8WW32 186 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 RUBCNQ92622 972 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 BTN2A3PQ96KV6 586 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 TBCBQ99426 244 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
PRKDC-206ENST00000536429 GABRG3Q99928 467 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 SLC2A11Q9BYW1 496 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 CIPCQ9C0C6 399 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 RAB6CQ9H0N0 254 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 SLC6A17Q9H1V8 727 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 PARD6AQ9NPB6 346 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 METTL5Q9NRN9 209 aaKnown RBP13.64□□□□□ -0.23
PRKDC-206ENST00000536429 TMPRSS4Q9NRS4 437 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRKDC-206ENST00000536429 THAP10Q9P2Z0 257 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms