RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 METTL24Q5JXM2 366 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 VWA5B1Q5TIE3 1220 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PCNX4Q63HM2 1172 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 FAM205BPQ63HN1 556 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC9A4Q6AI14 798 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LYSMD3Q7Z3D4 306 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GATAD2AQ86YP4 633 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RHOT2Q8IXI1 618 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HACE1Q8IYU2 909 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LGI2Q8N0V4 545 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LILRB2Q8N423 598 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 C4orf32Q8N8J7 132 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PKP2Q99959 881 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ANKRD2Q9GZV1 360 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HOXD1Q9GZZ0 328 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SOX17Q9H6I2 414 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 POLMQ9NP87 494 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 SAYSD1Q9NPB0 183 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PIH1D3Q9NQM4 214 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 GMIPQ9P107 970 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 EPS15L1Q9UBC2 864 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 POMPQ9Y244 141 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 IFT52Q9Y366 437 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TRAF6Q9Y4K3 522 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 FAM187AA6NFU0 413 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MOXD2PA6NHM9 499 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SNTNA6NMZ2 147 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 F8W8V4 182 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 STX16-NPEPL1H3BU86 382 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 NOP56O00567 594 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 NRP1O14786 923 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CFLARO15519 480 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 B4GAT1O43505 415 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MAN1A2O60476 641 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MAGEC1O60732 1142 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CDH16O75309 829 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LYPLA1O75608 230 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 STAM2O75886 525 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CDH1P12830 882 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC5A1P13866 664 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SPNP16150 400 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ZNF12P17014 697 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GMPRP36959 345 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SCNN1AP37088 669 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PTPN9P43378 593 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ACADVLP49748 655 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ARHGDIAP52565 204 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 BASP1P80723 227 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 GALK2Q01415 458 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 DSC3Q14574 896 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ARHGAP44Q17R89 818 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LSM12Q3MHD2 195 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 PLA2G4EQ3MJ16 856 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CIAPIN1Q6FI81 312 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RGMBQ6NW40 437 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TTC23LQ6PF05 361 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 FBXO46Q6PJ61 603 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 BLOC1S3Q6QNY0 202 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RNF207Q6ZRF8 634 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 C15orf52Q6ZUT6 534 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 KCNK18Q7Z418 384 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 LRP10Q7Z4F1 713 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLFN11Q7Z7L1 901 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HID1Q8IV36 788 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CPA6Q8N4T0 437 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TMEM35BQ8NCS4 154 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ADAM32Q8TC27 787 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TGFBRAP1Q8WUH2 860 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HERVK_113Q902F9 699 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PEX13Q92968 403 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MOCOSQ96EN8 888 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MED30Q96HR3 178 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CCDC138Q96M89 665 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SPSB2Q99619 263 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 IER2Q9BTL4 223 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 FAM126AQ9BYI3 521 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 GANQ9H2C0 597 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 DNAJC18Q9H819 358 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 COPRSQ9NQ92 184 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 KBTBD4Q9NVX7 518 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SCHIP1Q9P0W5 487 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 SFMBT1Q9UHJ3 866 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GTF3C4Q9UKN8 822 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RPL26L1Q9UNX3 145 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 IKBKGQ9Y6K9 419 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CASP8AP2Q9UKL3 1982 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ZNF532Q9HCE3 1301 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 A0A0X1KG70 313 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CAPN14A8MX76 684 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 AP1G1O43747 822 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TYROBPO43914 113 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MTRF1O75570 445 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 FAM155BO75949 473 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RSL1D1O76021 490 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 ERBB2P04626 1255 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CLEC2LP0C7M8 214 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 NCAM1P13591 858 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 COMTP21964 271 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ALDH4A1P30038 563 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms