RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SCAPQ12770 1279 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 KRT81Q14533 505 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 PDK2Q15119 407 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 DPYSL2Q16555 572 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 MS4A13Q5J8X5 152 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 C14orf80Q86SX3 495 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 SMRP1Q8NCR6 262 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 MS4A14Q96JA4 679 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 BTN2A3PQ96KV6 586 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CARD9Q9H257 536 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 POMKQ9H5K3 350 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CFAP97Q9P2B7 532 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 AGO1Q9UL18 857 aaKnown RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 HS3ST4Q9Y661 456 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 GREM1O60565 184 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 PRAMEF12O95522 483 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 KRT10P13645 584 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 DPYSL3Q14195 570 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 FAM78AQ5JUQ0 283 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 PIK3R6Q5UE93 754 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 NADSYN1Q6IA69 706 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 SPOCD1Q6ZMY3 1216 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 HTR3DQ70Z44 454 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 RIN3Q8TB24 985 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 FAM71BQ8TC56 605 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 AZIN2Q96A70 460 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 RBM41Q96IZ5 413 aaKnown RBP11.92□□□□□ -0.5
CDCA3-206ENST00000536241 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 C1orf74Q96LT6 269 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 MYADMQ96S97 322 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 HEMGNQ9BXL5 484 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 UBE2ZQ9H832 354 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-206ENST00000536241 GDE1Q9NZC3 331 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
CDCA3-206ENST00000536241 USP15Q9Y4E8 981 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-206ENST00000536241 GRXCR2A6NFK2 248 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 TRDMT1O14717 391 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 LRIG2O94898 1065 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 GOT1P17174 413 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 AMPD1P23109 780 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SLC6A4P31645 630 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 GBP2P32456 591 aaPredicted RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 CETN2P41208 172 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 VIPR2P41587 438 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 CDKN2BP42772 138 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SLC11A2P49281 568 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 COPS2P61201 443 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SEMA3BQ13214 749 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 AUHQ13825 339 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 KAZNQ674X7 775 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 Q6ZNB5 142 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 RASGEF1CQ8N431 466 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SUSD6Q92537 303 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 HLA-CQ95604 372 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 ASB16Q96NS5 453 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 LRRC3BQ96PB8 259 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 PRMT1Q99873 361 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 MAK16Q9BXY0 300 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 DCLK3Q9C098 648 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 SMARCAL1Q9NZC9 954 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
CDCA3-206ENST00000536241 VANGL2Q9ULK5 521 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 BRWD1Q9NSI6 2320 aa11.91□□□□□ -0.5
CDCA3-206ENST00000536241 E9PAM4 449 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 EEF2KO00418 725 aaKnown RBP11.9□□□□□ -0.5
CDCA3-206ENST00000536241 DAPK3O43293 454 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 LAMP2P13473 410 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 TACR2P21452 398 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 WEE1P30291 646 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ARL4AP40617 200 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ADCY2Q08462 1091 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 MTA1Q13330 715 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 FAM133BQ5BKY9 247 aaKnown RBP11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ANKRD20A8PQ5CZ79 823 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ARTNQ5T4W7 220 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ADGRF1Q5T601 910 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 FBXL22Q6P050 247 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 RFWD3Q6PCD5 774 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ADAT2Q7Z6V5 191 aaKnown RBP11.9□□□□□ -0.5
CDCA3-206ENST00000536241 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA3-206ENST00000536241 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 ZNF683Q8IZ20 524 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 TSC1Q92574 1164 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms