RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 LY6G5CQ5SRR4 150 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 LYSMD4Q5XG99 296 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TWF2Q6IBS0 349 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 ZSCAN25Q6NSZ9 544 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 GIMAP6Q6P9H5 292 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 VITQ6UXI7 678 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 HAUS6Q7Z4H7 955 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 SRRM1Q8IYB3 904 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 TSTD1Q8NFU3 115 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 OR14K1Q8NGZ2 314 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 CEP76Q8TAP6 659 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 RSPH1Q8WYR4 309 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 FGF11Q92914 225 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 SMARCD2Q92925 531 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 STRBPQ96SI9 672 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 TMEM47Q9BQJ4 181 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TMEM175Q9BSA9 504 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 PI4K2AQ9BTU6 479 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 NACAP1Q9BZK3 213 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 CPNE5Q9HCH3 593 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 IL17RBQ9NRM6 502 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 GPR27Q9NS67 375 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TMEM74BQ9NUR3 256 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 DSEQ9UL01 958 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 DOPEY2Q9Y3R5 2298 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 LCTP09848 1927 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 PLIN4Q96Q06 1357 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 LAMA4Q16363 1823 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 NBPF19A0A087WUL8 3843 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 GSTTP1A0A1W2PQM5 241 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 MYBPHLA2RUH7 354 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 HEPACAM2A8MVW5 462 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 OFD1O75665 1012 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 STAM2O75886 525 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 DDHD2O94830 711 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 POMCP01189 267 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 SERPINF2P08697 491 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 ATXN1LP0C7T5 689 aaKnown RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 POLR2MP0CAP2 368 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 PDHBP11177 359 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 COL6A2P12110 1019 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 JUPP14923 745 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 FGFR4P22455 802 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 FCARP24071 287 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 PTGER3P43115 390 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 MEOX1P50221 254 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 UCNP55089 124 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 NLRP11P59045 1033 aaKnown RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 IL13RA1P78552 427 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 ZNF543Q08ER8 600 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 RIN1Q13671 783 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 SLC5A9Q2M3M2 681 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 USP41Q3LFD5 358 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 ZNF394Q53GI3 561 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 LMBRD2Q68DH5 695 aaPredicted RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 ANO7Q6IWH7 933 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 FILIP1Q7Z7B0 1213 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 MFSD6LQ8IWD5 586 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 PGBD4Q96DM1 585 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 ZNF668Q96K58 619 aaPredicted RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 SENP7Q9BQF6 1050 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 API5Q9BZZ5 524 aaKnown RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 BOLA2Q9H3K6 86 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 FNIP2Q9P278 1114 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 FBXW11Q9UKB1 542 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 NOB1Q9ULX3 412 aaKnown RBP4.39□□□□□ -1.71
YBX3-205ENST00000536107 EFR3BQ9Y2G0 817 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 PCDHGB7Q9Y5F8 929 aa4.39□□□□□ -1.71
YBX3-205ENST00000536107 POLQO75417 2590 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ZNF197O14709 1029 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 TADA2AO75478 443 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ONECUT2O95948 504 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 IFIT2P09913 472 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 PTPN2P17706 415 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 GNAT2P19087 354 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 HOXA9P31269 272 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ACTN2P35609 894 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ADCY8P40145 1251 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 CLK3P49761 638 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 HSD17B4P51659 736 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 STAT5BP51692 787 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 MRPS9P82933 396 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 TLE1Q04724 770 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 PPARAQ07869 468 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 DMC1Q14565 340 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 STILQ15468 1287 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 QRICH1Q2TAL8 776 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 GPATCH4Q5T3I0 446 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 CYP4A22Q5TCH4 519 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 KIAA1614Q5VZ46 1190 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 PRSS55Q6UWB4 352 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms