RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PYROXD2Q8N2H3 581 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 HSPH1Q92598 858 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 TOP1MTQ969P6 601 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 TSGA13Q96PP4 275 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 CCDC134Q9H6E4 229 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 STAP1Q9ULZ2 295 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 MFHAS1Q9Y4C4 1052 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 TCRBV7S3A2A0A539 114 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 MTMR11A4FU01 709 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 GFRA2O00451 464 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 F9P00740 461 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 HAPLN1P10915 354 aaPredicted RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 BDNFP23560 247 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 RABGGTBP53611 331 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 GPX6P59796 221 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 HTRA4P83105 476 aaPredicted RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 PPIDQ08752 370 aaKnown RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 KCTD11Q693B1 232 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 CEP128Q6ZU80 1094 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 CYS1Q717R9 158 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 MAP7D3Q8IWC1 876 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 THEM5Q8N1Q8 247 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 TADA1Q96BN2 335 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 FCRL2Q96LA5 508 aaPredicted RBP8.27□□□□□ -1.09
COL21A1-212ENST00000535941 CCDC114Q96M63 670 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 FAM118BQ9BPY3 351 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 HIPK3Q9H422 1215 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 HCSTQ9UBK5 93 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 NOD1Q9Y239 953 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 PCDHB7Q9Y5E2 793 aa8.27□□□□□ -1.09
COL21A1-212ENST00000535941 SUN1O94901 812 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 GOT1P17174 413 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MMP13P45452 471 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SLC18A1P54219 525 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 EIF3EP60228 445 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ATP11AP98196 1134 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 PKN2Q16513 984 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 LRRC26Q2I0M4 334 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 RTP2Q5QGT7 225 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 STEAP4Q687X5 459 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 FUT10Q6P4F1 479 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 RFX8Q6ZV50 586 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 DQX1Q8TE96 717 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 RNF139Q8WU17 664 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CENPTQ96BT3 561 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 HDAC11Q96DB2 347 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MCMBPQ9BTE3 642 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 COLEC11Q9BWP8 271 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 NMUR1Q9HB89 426 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TMPRSS4Q9NRS4 437 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ABCC13Q9NSE7 274 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 GPATCH2LQ9NWQ4 482 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CLIC5Q9NZA1 410 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 PPARGC1AQ9UBK2 798 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TRIM43BA6NCK2 446 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ENO4A6NNW6 628 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MFSD11O43934 449 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 FSBPO95073 299 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TIMP1P01033 207 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SLC8A3P57103 927 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ROR1Q01973 937 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 WASHC5Q12768 1159 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ELAVL2Q12926 359 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 AUHQ13825 339 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SLC29A2Q14542 456 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 FNBP1LQ5T0N5 605 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SH2D5Q6ZV89 423 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TAS1R1Q7RTX1 841 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CTU1Q7Z7A3 348 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CAND1Q86VP6 1230 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 RFX6Q8HWS3 928 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CMTR2Q8IYT2 770 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 DCP1BQ8IZD4 617 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 NPWQ8N729 165 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TRIM43Q96BQ3 446 aaPredicted RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 SERPINB12Q96P63 405 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 FRMD8Q9BZ67 464 aaPredicted RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 RETREG1Q9H6L5 497 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 PPCSQ9HAB8 311 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 TMEM165Q9HC07 324 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 MTRF1LQ9UGC7 380 aaKnown RBP8.26□□□□□ -1.09
COL21A1-212ENST00000535941 ACTL7BQ9Y614 415 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 COL4A2P08572 1712 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 C2orf16Q68DN1 1984 aa8.26□□□□□ -1.09
COL21A1-212ENST00000535941 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
COL21A1-212ENST00000535941 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
COL21A1-212ENST00000535941 ATF6P18850 670 aa8.25□□□□□ -1.09
COL21A1-212ENST00000535941 CSRP3P50461 194 aa8.25□□□□□ -1.09
COL21A1-212ENST00000535941 YWHAGP61981 247 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL21A1-212ENST00000535941 USP46P62068 366 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms