RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 TMC2Q8TDI7 906 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 TAS1R2Q8TE23 839 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 WFIKKN2Q8TEU8 576 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 RNF139Q8WU17 664 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 SLC39A7Q92504 469 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 SKA1Q96BD8 255 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 HEXIM2Q96MH2 286 aaKnown RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 BACH2Q9BYV9 841 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 NIF3L1Q9GZT8 377 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 FBRSQ9HAH7 460 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 CYP3A43Q9HB55 503 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 SGK2Q9HBY8 427 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 AASDHPPTQ9NRN7 309 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 ABCB8Q9NUT2 735 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 SHROOM3Q8TF72 1996 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 PLXNA2O75051 1894 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 E9PAM4 449 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 PDXKO00764 312 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 ENC1O14682 589 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 DFNA5O60443 496 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 RFPL3O75679 317 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 LDOC1O95751 146 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 ATP5BP06576 529 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 ITGAVP06756 1048 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 TRIM49P0CI25 452 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 TRIM49CP0CI26 452 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 KRT13P13646 458 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 HOXD9P28356 352 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 HLA-FP30511 346 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 VAMP7P51809 220 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 TKTL1P51854 596 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 STK4Q13043 487 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 DNAJC3Q13217 504 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 ZNF776Q68DI1 518 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 KIAA0895LQ68EN5 471 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 PIGZQ86VD9 579 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 SLC9A9Q8IVB4 645 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 FMNL3Q8IVF7 1028 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 RBBP8NLQ8NC74 664 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 KIAA0895Q8NCT3 520 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 BAP1Q92560 729 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 GOLGA1Q92805 767 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 TMA16Q96EY4 203 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 CNDP2Q96KP4 475 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 SLC6A18Q96N87 628 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 TMEM245Q9H330 911 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 LRRC4Q9HBW1 653 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 APOBEC3GQ9HC16 384 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 PRSS16Q9NQE7 514 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 OLA1Q9NTK5 396 aaKnown RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 USP3Q9Y6I4 520 aa8.39□□□□□ -1.07
CHFR-211ENST00000535897 MUC22E2RYF6 1773 aaPredicted RBP8.39□□□□□ -1.07
CHFR-211ENST00000535897 A0A1B0GTQ1 180 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 CBX4O00257 560 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 VILLO15195 856 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 CALUO43852 315 aaPredicted RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 RNASEH2AO75792 299 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 YEATS4O95619 227 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ZBED1O96006 694 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 DLDP09622 509 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 PABPC1P11940 636 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 POLR2EP19388 210 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 NR2F2P24468 414 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 EIF2S3P41091 472 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 ZNF445P59923 1031 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ST8SIA6P61647 398 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 TARDBPQ13148 414 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHFR-211ENST00000535897 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 C1orf220Q5T0J3 134 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 MBLAC2Q68D91 279 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 INTS8Q75QN2 995 aaKnown RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 ZNF605Q86T29 641 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ADIPOR2Q86V24 386 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 FAM217AQ8IXS0 508 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 SIX6OS1Q8N1H7 587 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 EID2Q8N6I1 236 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 EDEM1Q92611 657 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
CHFR-211ENST00000535897 OMDQ99983 421 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 ULBP1Q9BZM6 244 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 MTG2Q9H4K7 406 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 FBXL12Q9NXK8 326 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 SUN2Q9UH99 717 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms