RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 EIF3CLB5ME19 914 aaKnown RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 PAGE1O75459 146 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 NDUFA10O95299 355 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 PENKP01210 267 aaPredicted RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 TYRP14679 529 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 PSMA2P25787 234 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 OPRD1P41143 372 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 SLC6A11P48066 632 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 SGSHP51688 502 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 AMPD2Q01433 879 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 MS4A13Q5J8X5 152 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 ETFBKMTQ8IXQ9 262 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 FLCNQ8NFG4 579 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 FNIP1Q8TF40 1166 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 EIF3CQ99613 913 aaKnown RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 DDX50Q9BQ39 737 aaKnown RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 FOXQ1Q9C009 403 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 FBRSL1Q9HCM7 1045 aaKnown RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 MTF2Q9Y483 593 aaPredicted RBP12.5□□□□□ -0.41
CHD4-203ENST00000535717 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 ZDBF2Q9HCK1 2354 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 STK25O00506 426 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 TACR2P21452 398 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 TARSP26639 723 aaKnown RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 ADRA1BP35368 520 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 MAGEA1P43355 309 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 GALK1P51570 392 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 MESP2Q0VG99 397 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 MTA1Q13330 715 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 PON2Q15165 354 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 SPA17Q15506 151 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 BMP8AQ7Z5Y6 402 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 CHSY1Q86X52 802 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 LGI2Q8N0V4 545 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 CCDC185Q8N715 623 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 ZNF564Q8TBZ8 553 aaPredicted RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 CD101Q93033 1021 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 BTBD6Q96KE9 485 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 PRICKLE1Q96MT3 831 aaPredicted RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 CTTNBP2NLQ9P2B4 639 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
CHD4-203ENST00000535717 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 SNX10Q9Y5X0 201 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
CHD4-203ENST00000535717 FAM170BA6NMN3 283 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 TRIM24O15164 1050 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 CACNG3O60359 315 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 GPR37L1O60883 481 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 TBL1XO60907 577 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 TULP3O75386 442 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 CYBBP04839 570 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 KCNA4P22459 653 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 HOXD9P28356 352 aaPredicted RBP12.48□□□□□ -0.41
CHD4-203ENST00000535717 GGCXP38435 758 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
CHD4-203ENST00000535717 AUHQ13825 339 aaKnown RBP12.48□□□□□ -0.41
CHD4-203ENST00000535717 UBXN2BQ14CS0 331 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 RNF43Q68DV7 783 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 CFAP52Q8N1V2 620 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 HJURPQ8NCD3 748 aaPredicted RBP12.48□□□□□ -0.41
CHD4-203ENST00000535717 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 NELL2Q99435 816 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 MAGEB5Q9BZ81 275 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 OSGEPQ9NPF4 335 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms