RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NDUFA8P51970 172 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 KRT85P78386 507 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 BST2Q10589 180 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 DCAF12L1Q5VU92 463 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 LCLAT1Q6UWP7 414 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 ELOA2Q8IYF1 753 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 RGL4Q8IZJ4 473 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 SLC35F5Q8WV83 523 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 GPR174Q9BXC1 333 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 SLC6A17Q9H1V8 727 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 SGK2Q9HBY8 427 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-206ENST00000535668 CFAP46Q8IYW2 2715 aa11.71□□□□□ -0.54
CLSTN3-206ENST00000535668 PTPRBP23467 1997 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 COL5A1P20908 1838 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CETN3O15182 167 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 VDRP11473 427 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CDK4P11802 303 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CD58P19256 250 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 TBXAS1P24557 533 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 PRKCHP24723 683 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 MATKP42679 507 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 YWHAEP62258 255 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CUL2Q13617 745 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 STILQ15468 1287 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SMAD1Q15797 465 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CNGA2Q16280 664 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 HLA-BQ31612 363 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 BSPRYQ5W0U4 402 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 KIAA1324Q6UXG2 1013 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SLCO6A1Q86UG4 719 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 AHI1Q8N157 1196 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 CACTIN-AS1Q8N1I8 211 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 DEFB119Q8N690 84 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 FIBINQ8TAL6 211 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 IGSF8Q969P0 613 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SLC35C1Q96A29 364 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 MYO19Q96H55 970 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 HSFY1Q96LI6 401 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 GSDMAQ96QA5 445 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 RSPH9Q9H1X1 276 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 GAREM1Q9H706 876 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 FSCN3Q9NQT6 498 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 TM7SF3Q9NS93 570 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 ADAMTS1Q9UHI8 967 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 TSPAN16Q9UKR8 245 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
CLSTN3-206ENST00000535668 KALRNO60229 2985 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 SLC12A8A0AV02 714 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 YJEFN3A6XGL0 299 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 E7ENQ6 273 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 P4HA2O15460 535 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 GABBR2O75899 941 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ZNF202O95125 648 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ATP5BP06576 529 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 EPHX1P07099 455 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 CD27P26842 260 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 MAOBP27338 520 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 DAOAP59103 153 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 LRRC63Q05C16 580 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 SCAPQ12770 1279 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 EIF4EBP2Q13542 120 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 SGO2Q562F6 1265 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 PIK3R6Q5UE93 754 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 NUGGCQ68CJ6 796 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 SERPINA13PQ6UXR4 307 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 RSRC2Q7L4I2 434 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 FMNL3Q8IVF7 1028 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 HSCBQ8IWL3 235 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 UNC45BQ8IWX7 931 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ZCCHC9Q8N567 271 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 DDI1Q8WTU0 396 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 TATDN2Q93075 761 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 JAKMIP2Q96AA8 810 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ARID3AQ99856 593 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ULBP1Q9BZM6 244 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 PRSS16Q9NQE7 514 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 CNTN6Q9UQ52 1028 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
CLSTN3-206ENST00000535668 ADAMTS20P59510 1910 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 ITIH6Q6UXX5 1313 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 A0A087WV48 116 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 MEI4A8MW99 385 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms