RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MTDHQ86UE4 582 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 MPP6Q9NZW5 540 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 CAMSAP1Q5T5Y3 1602 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 H3BN98 237 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SNPHO15079 494 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 DYRK3O43781 588 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SLC2A3P11169 496 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PKN1Q16512 942 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 AGKQ53H12 422 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 TPGS1Q6ZTW0 290 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SYN2Q92777 582 aaPredicted RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SNCAIPQ9Y6H5 919 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 C1orf232A0A0U1RR37 186 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 FOXP2O15409 715 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ALDH2P05091 517 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 EIF2S1P05198 315 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ALOX12P18054 663 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 CDC25CP30307 473 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SLC39A12Q504Y0 691 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 XRRA1Q6P2D8 792 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PPP1R10Q96QC0 940 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 DCUN1D5Q9BTE7 237 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 DDX4Q9NQI0 724 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 GLP2RO95838 553 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 TCEA1P23193 301 aaKnown RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 ABCG1P45844 678 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PTPN11Q06124 597 aaPredicted RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 AADACL2Q6P093 401 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 WDR49Q8IV35 697 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 TMEM79Q9BSE2 394 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 LACRTQ9GZZ8 138 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 GLRA3O75311 464 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 ADORA2AP29274 412 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 ZNF284Q2VY69 593 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 TTLL9Q3SXZ7 439 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 FBXO47Q5MNV8 452 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PDZK1Q5T2W1 519 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 TTI2Q6NXR4 508 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 DCDC2Q9UHG0 476 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 GRIK3Q13003 919 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 AP5B1Q2VPB7 878 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 DIABLOQ9NR28 239 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 IDH3BO43837 385 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PDE5AO76074 875 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 CLTBP09497 229 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 SHMT1P34896 483 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 GRK3P35626 688 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 NR6A1Q15406 480 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 INAQ16352 499 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 ARMCX4Q5H9R4 360 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 C16orf46Q6P387 395 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 SV2AQ7L0J3 742 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 MIEF2Q96C03 454 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 ZNF304Q9HCX3 659 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.348e-7■■■■■ 35
SPG11-203ENST00000535302 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 SLC26A4O43511 780 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 USP17L7P0C7H9 530 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 CYP4F2P78329 520 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 MFSD10Q14728 455 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
SPG11-203ENST00000535302 KIAA0895Q8NCT3 520 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
SPG11-203ENST00000535302 MTSS1O43312 755 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CHRNB3Q05901 458 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PLD1Q13393 1074 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CBWD3Q5JTY5 395 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CBWD5Q5RIA9 395 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 EFL1Q7Z2Z2 1120 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 SYT15Q9BQS2 421 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 ARHGAP20Q9P2F6 1191 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 DAPK2Q9UIK4 370 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 DUSP12Q9UNI6 340 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 MGAT1P26572 445 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms