RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SNX31Q8N9S9 440 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 EXT2Q93063 718 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 OXCT2Q9BYC2 517 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-232ENST00000535094 FRMD8P1Q9BZ68 369 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-232ENST00000535094 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-232ENST00000535094 HDAC4P56524 1084 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 KCNJ11Q14654 390 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 EFCAB12Q6NXP0 572 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 ZNF276Q8N554 614 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 BHLHE22Q8NFJ8 381 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-232ENST00000535094 MZB1Q8WU39 189 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 NRDE2Q9H7Z3 1164 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
MCF2L-232ENST00000535094 STX16-NPEPL1H3BU86 382 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 PHGDHO43175 533 aaKnown RBP16.33■□□□□ 0.21
MCF2L-232ENST00000535094 STAG3L1P0CL83 205 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 IDH3AP50213 366 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 ABCE1P61221 599 aaKnown RBP16.33■□□□□ 0.21
MCF2L-232ENST00000535094 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 ZNF781Q8N8C0 355 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 DIS3LQ8TF46 1054 aaKnown RBP16.33■□□□□ 0.21
MCF2L-232ENST00000535094 PCDH18Q9HCL0 1135 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 EPS15L1Q9UBC2 864 aa16.33■□□□□ 0.21
MCF2L-232ENST00000535094 E7ESA3 106 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 TRDMT1O14717 391 aaKnown RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 RGS20O76081 388 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 ITGA2BP08514 1039 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 CRHR1P34998 444 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 GALK1P51570 392 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 MPZL3Q6UWV2 235 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 PYROXD2Q8N2H3 581 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 CMASQ8NFW8 434 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 SEPT1Q8WYJ6 367 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 NDRG1Q92597 394 aaKnown RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 DCUN1D5Q9BTE7 237 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 ARHGEF4Q9NR80 690 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 BFARQ9NZS9 450 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 MFHAS1Q9Y4C4 1052 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 SNX13Q9Y5W8 968 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 COMMD3-BMI1R4GMX3 469 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 KPNA7A9QM74 516 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 DHRS4L1P0CG22 281 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 SLC12A2P55011 1212 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 ANKRD20A4Q4UJ75 823 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 DCAF6Q58WW2 860 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 TMEM198Q66K66 360 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.2
MCF2L-232ENST00000535094 RCN3Q96D15 328 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 DCUN1D1Q96GG9 259 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 DEFB129Q9H1M3 183 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 AP4B1Q9Y6B7 739 aa16.33■□□□□ 0.2
MCF2L-232ENST00000535094 POLBP06746 335 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 PGK2P07205 417 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 PSMB4P28070 264 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 ASPAP45381 313 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 NAGLUP54802 743 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 INHBEP58166 350 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 LRRC43Q8N309 656 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 ACO2Q99798 780 aaKnown RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 CCDC106Q9BWC9 280 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 MYOZ2Q9NPC6 264 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 DCDC2Q9UHG0 476 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 LAMB2P55268 1798 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 A0A096LPK6 155 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 CCR10P46092 362 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 NME5P56597 212 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 USP10Q14694 798 aaKnown RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 KYAT3Q6YP21 454 aaKnown RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 SLC4A11Q8NBS3 891 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 ZNF280CQ8ND82 737 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 SPATA33Q96N06 139 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 CYP4F12Q9HCS2 524 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 PLIN3O60664 434 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 EGFRP00533 1210 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 FDFT1P37268 417 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 TEDDM1Q5T9Z0 273 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 LCA5Q86VQ0 697 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 KYQ8NBH2 561 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 OR52K1Q8NGK4 314 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 ILKAPQ9H0C8 392 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
MCF2L-232ENST00000535094 GGA3Q9NZ52 723 aa16.32■□□□□ 0.2
MCF2L-232ENST00000535094 FETUBQ9UGM5 382 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms