RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TAC4Q86UU9 113 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 NLRP14Q86W24 1093 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 FAM172AQ8WUF8 416 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 RIPOR3Q96MK2 946 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 SLC46A2Q9BY10 475 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 MARCH2Q9P0N8 246 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 NUDT5Q9UKK9 219 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 BRWD1Q9NSI6 2320 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 LRCH4O75427 683 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 RASSF9O75901 435 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 GJA1P17302 382 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 HDCP19113 662 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 FSHRP23945 695 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 CXCR3P49682 368 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 HDAC4P56524 1084 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 SLC7A9P82251 487 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 ATP11AP98196 1134 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 DEUP1Q05D60 604 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 RING1Q06587 406 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 EFEMP1Q12805 493 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 CUL1Q13616 776 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 TEAD2Q15562 447 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 TRIP4Q15650 581 aaPredicted RBP12.75□□□□□ -0.37
SCARB1-204ENST00000535005 GPR158Q5T848 1215 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 SH3PXD2AQ5TCZ1 1133 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 C6orf89Q6UWU4 347 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 SMRP1Q8NCR6 262 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 SLC39A13Q96H72 371 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 APOL5Q9BWW9 433 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 SFMBT1Q9UHJ3 866 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 MCM8Q9UJA3 840 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 TLR6Q9Y2C9 796 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 ANAPC1Q9H1A4 1944 aa12.75□□□□□ -0.37
SCARB1-204ENST00000535005 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 TRAV19A0A0A6YYK7 116 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 TMEM110-MUSTN1A8MSY1 372 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 COMTP21964 271 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 COG7P83436 770 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 PPP2R5DQ14738 602 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 LRRC38Q5VT99 294 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 ITFG1Q8TB96 612 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 SUSD6Q92537 303 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 NECTIN4Q96NY8 510 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 KLF16Q9BXK1 252 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-204ENST00000535005 UBE2ZQ9H832 354 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-204ENST00000535005 PIGVQ9NUD9 493 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.371e-7■■□□□ 13.4
SCARB1-204ENST00000535005 CD207Q9UJ71 328 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 RASAL2Q9UJF2 1139 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 REV3LO60673 3130 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 OBSL1O75147 1896 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 MDM4O15151 490 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 IGLV3-27P01718 113 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CEBPBP17676 345 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 MIPP30301 263 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CDO1Q16878 200 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 RAB6CQ53S08 254 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 BRMS1LQ5PSV4 323 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 STXBP5Q5T5C0 1151 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 EP400NLQ6ZTU2 488 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CCDC121Q6ZUS5 278 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CPNE8Q86YQ8 564 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CMTM8Q8IZV2 173 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 ARL14EPQ8N8R7 260 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-204ENST00000535005 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 ADAM32Q8TC27 787 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CD101Q93033 1021 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 NTAN1Q96AB6 310 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
SCARB1-204ENST00000535005 CYP2S1Q96SQ9 504 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 TLR10Q9BXR5 811 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 NACA2Q9H009 215 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 RAB6CQ9H0N0 254 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 GOLPH3Q9H4A6 298 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 TRPC7Q9HCX4 862 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■■■□ 23.8
SCARB1-204ENST00000535005 ARHGAP26Q9UNA1 814 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
SCARB1-204ENST00000535005 SZT2Q5T011 3432 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SLC12A8A0AV02 714 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SPOPO43791 374 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SLC2A3P11169 496 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 TCF3P15923 654 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SLC8A1P32418 973 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 AIF1P55008 147 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 TBX4P57082 545 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SLC25A11Q02978 314 aaKnown RBP12.73□□□□□ -0.37
SCARB1-204ENST00000535005 NME3Q13232 169 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 MTA1Q13330 715 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms