RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NPY6RQ99463 290 aa11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 OSBPL8Q9BZF1 889 aa11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 DDIT4Q9NX09 232 aa11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 RCOR3Q9P2K3 495 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 PCSK1NQ9UHG2 260 aa11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 RASAL2Q9UJF2 1139 aa11.35□□□□□ -0.59
CCDC90B-218ENST00000533761 FAM92AA1XBS5 289 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 SLC38A8A6NNN8 435 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF189O75820 626 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ENDOD1O94919 500 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 FGF19O95750 216 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 KCNA5P22460 613 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ARL4AP40617 200 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 FNTAP49354 379 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 CDH6P55285 790 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 HDAC4P56524 1084 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 NME3Q13232 169 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 SMTNL2Q2TAL5 461 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 PABPC1LQ4VXU2 614 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 SCAMP5Q8TAC9 235 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 RNF34Q969K3 372 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 TRMT2BQ96GJ1 504 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 ASAH2Q9NR71 780 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 IL37Q9NZH6 218 aa11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 MAGED2Q9UNF1 606 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-218ENST00000533761 PDE2AO00408 941 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 PHF2O75151 1096 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 RARAP10276 462 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 CCR1P32246 355 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 MLLT3P42568 568 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 C2orf54Q08AI8 447 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 NNTQ13423 1086 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 DPYSL2Q16555 572 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 KCNT1Q5JUK3 1230 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 BRMS1LQ5PSV4 323 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 BZW1Q7L1Q6 419 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 SMRP1Q8NCR6 262 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 RIPOR3Q96MK2 946 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 TTLL2Q9BWV7 592 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 APOL5Q9BWW9 433 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 NACA2Q9H009 215 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 S1PR5Q9H228 398 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 WDCPQ9H6R7 721 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 DONSONQ9NYP3 566 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 CD207Q9UJ71 328 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 AP4E1Q9UPM8 1137 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 NAALADL1Q9UQQ1 740 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 BRWD1Q9NSI6 2320 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 EYSQ5T1H1 3165 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 H3BQ06 376 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF197O14709 1029 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 ERLIN1O75477 346 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 GAS8O95995 478 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 KDELR1P24390 212 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 HTR7P34969 479 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 CDKN2BP42772 138 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 MTHFRP42898 656 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 EPHA5P54756 1037 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 SCAPQ12770 1279 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 MAP9Q49MG5 647 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 PDZD4Q76G19 769 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 BNIPLQ7Z465 357 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 GRASPQ7Z6J2 395 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 ARFGAP1Q8N6T3 406 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 DQX1Q8TE96 717 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 EDEM1Q92611 657 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 MAGOHBQ96A72 148 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 NECTIN4Q96NY8 510 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 GCNAQ96QF7 691 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 AP1M1Q9BXS5 423 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 RAB17Q9H0T7 212 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 TRPM5Q9NZQ8 1165 aa11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 DNMT3BQ9UBC3 853 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 UTP11Q9Y3A2 253 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-218ENST00000533761 CLUHO75153 1309 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 hCG_1818297A0A087WSY0 165 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 SYNJ2BP-COX16A0A087WUM0 186 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 A0A1W2PQH9 124 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms