RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CRY1Q16526 586 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 MS4A13Q5J8X5 152 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 TTC39BQ5VTQ0 682 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 HEATR6Q6AI08 1181 aaKnown RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 NADSYN1Q6IA69 706 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 SDE2Q6IQ49 451 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 MMS22LQ6ZRQ5 1243 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 CHSY1Q86X52 802 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 PHF13Q86YI8 300 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 CCDC33Q8N5R6 958 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 TXNDC5Q8NBS9 432 aaKnown RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 PGAP3Q96FM1 320 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 NPY6RQ99463 290 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 AGPAT1Q99943 283 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 C11orf70Q9BRQ4 267 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 TTYH3Q9C0H2 523 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 POLMQ9NP87 494 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 EBF1Q9UH73 591 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 RAB23Q9ULC3 237 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 SYNJ2BP-COX16A0A087WUM0 186 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 KCNU1A8MYU2 1149 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 PRRT4C9JH25 899 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 F5H5T6 163 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 GOLGA8SH3BPF8 625 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 M0QYT0 321 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 AXIN1O15169 862 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 TIMM44O43615 452 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 TBL1XO60907 577 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 NTSR1P30989 418 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 SLC6A4P31645 630 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 SULT1E1P49888 294 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 PITX1P78337 314 aaPredicted RBP16.41■□□□□ 0.22
TSKU-204ENST00000533752 NME3Q13232 169 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 BRMS1LQ5PSV4 323 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
TSKU-204ENST00000533752 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 ALYREFQ86V81 257 aaKnown RBP16.41■□□□□ 0.22
TSKU-204ENST00000533752 CHPFQ8IZ52 775 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSKU-204ENST00000533752 NT5C3BQ969T7 300 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 PRICKLE1Q96MT3 831 aaPredicted RBP16.41■□□□□ 0.22
TSKU-204ENST00000533752 AIPL1Q9NZN9 384 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 ADAM22Q9P0K1 906 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 COX16Q9P0S2 106 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 SMG5Q9UPR3 1016 aaKnown RBP16.41■□□□□ 0.22
TSKU-204ENST00000533752 ATG2BQ96BY7 2078 aa16.41■□□□□ 0.22
TSKU-204ENST00000533752 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 SGK1O00141 431 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
TSKU-204ENST00000533752 HNRNPLP14866 589 aaKnown RBP eCLIP16.4■□□□□ 0.22
TSKU-204ENST00000533752 TACR2P21452 398 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
TSKU-204ENST00000533752 DMWDQ09019 674 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 CDH18Q13634 790 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 C2CD6Q53TS8 623 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 RABGAP1LQ5R372 815 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 EGFLAMQ63HQ2 1017 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 AHI1Q8N157 1196 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 METTL5Q9NRN9 209 aaKnown RBP16.4■□□□□ 0.22
TSKU-204ENST00000533752 TMEM59LQ9UK28 342 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 MYO15AQ9UKN7 3530 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 VPS13AQ96RL7 3174 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
TSKU-204ENST00000533752 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 ADAM23O75077 832 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 PABPC1P11940 636 aaKnown RBP16.39■□□□□ 0.21
TSKU-204ENST00000533752 HOXB2P14652 356 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 TNFAIP3P21580 790 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 HLA-FP30511 346 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
TSKU-204ENST00000533752 FLT3P36888 993 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 PBX1P40424 430 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 PRKCIP41743 596 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 CXCR3P49682 368 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 SGSHP51688 502 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 DEUP1Q05D60 604 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 SIM2Q14190 667 aaPredicted RBP16.39■□□□□ 0.21
TSKU-204ENST00000533752 GEN1Q17RS7 908 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 OTUD1Q5VV17 481 aaPredicted RBP16.39■□□□□ 0.21
TSKU-204ENST00000533752 RAP1GAP2Q684P5 730 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 ANO7Q6IWH7 933 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 MON1BQ7L1V2 547 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 ASCL5Q7RTU5 278 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 C11orf74Q86VG3 221 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 RASSF3Q86WH2 238 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 LGI2Q8N0V4 545 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 SUMF1Q8NBK3 374 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 C3orf20Q8ND61 904 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms