RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 CCR1P32246 355 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 MATKP42679 507 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 FMO1Q01740 532 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.329e-6■■■■□ 23.7
RDX-214ENST00000533678 EIF4HQ15056 248 aaKnown RBP17.02■□□□□ 0.32
RDX-214ENST00000533678 FAM133BQ5BKY9 247 aaKnown RBP17.02■□□□□ 0.32
RDX-214ENST00000533678 ARCQ7LC44 396 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 ANKS1BQ7Z6G8 1248 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 RASSF3Q86WH2 238 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 XYLT1Q86Y38 959 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.32
RDX-214ENST00000533678 ADAM32Q8TC27 787 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 GAB3Q8WWW8 586 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 P2RY11Q96G91 374 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.02■□□□□ 0.32
RDX-214ENST00000533678 STAP1Q9ULZ2 295 aa17.02■□□□□ 0.32
RDX-214ENST00000533678 SGK1O00141 431 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 TSPAN3O60637 253 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 TPM1P09493 284 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 CHRNB2P17787 502 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 ABCB4P21439 1286 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 SIM2Q14190 667 aaPredicted RBP17.01■□□□□ 0.31
RDX-214ENST00000533678 NR1I3Q14994 352 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 ZC3H12AQ5D1E8 599 aaKnown RBP17.01■□□□□ 0.31
RDX-214ENST00000533678 NAA35Q5VZE5 725 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 C11orf74Q86VG3 221 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 WFIKKN2Q8TEU8 576 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 CPA5Q8WXQ8 436 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 RUBCNQ92622 972 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
RDX-214ENST00000533678 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 DDIT4Q9NX09 232 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 SMG5Q9UPR3 1016 aaKnown RBP17.01■□□□□ 0.31
RDX-214ENST00000533678 PAXBP1Q9Y5B6 917 aa17.01■□□□□ 0.31
RDX-214ENST00000533678 WDR87Q6ZQQ6 2873 aa17■□□□□ 0.31
RDX-214ENST00000533678 GOLGA6L7A0A1B0GV03 622 aa17■□□□□ 0.31
RDX-214ENST00000533678 KCNU1A8MYU2 1149 aa17■□□□□ 0.31
RDX-214ENST00000533678 ZBTB24O43167 697 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 ADAM23O75077 832 aa17■□□□□ 0.31
RDX-214ENST00000533678 GRAP2O75791 330 aa17■□□□□ 0.31
RDX-214ENST00000533678 RPP40O75818 363 aaKnown RBP17■□□□□ 0.31
RDX-214ENST00000533678 F9P00740 461 aa17■□□□□ 0.31
RDX-214ENST00000533678 UNGP13051 313 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 MMP8P22894 467 aa17■□□□□ 0.31
RDX-214ENST00000533678 SLC6A4P31645 630 aa17■□□□□ 0.31
RDX-214ENST00000533678 GEN1Q17RS7 908 aa17■□□□□ 0.31
RDX-214ENST00000533678 MS4A13Q5J8X5 152 aa17■□□□□ 0.31
RDX-214ENST00000533678 ACBD5Q5T8D3 534 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 FAM102AQ5T9C2 384 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 LAIR1Q6GTX8 287 aa17■□□□□ 0.31
RDX-214ENST00000533678 NADSYN1Q6IA69 706 aa17■□□□□ 0.31
RDX-214ENST00000533678 TMEM92Q6UXU6 159 aa17■□□□□ 0.31
RDX-214ENST00000533678 CEP68Q76N32 757 aa17■□□□□ 0.31
RDX-214ENST00000533678 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 CHPFQ8IZ52 775 aa17■□□□□ 0.31
RDX-214ENST00000533678 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.31
RDX-214ENST00000533678 RNF34Q969K3 372 aa17■□□□□ 0.31
RDX-214ENST00000533678 NT5C3BQ969T7 300 aa17■□□□□ 0.31
RDX-214ENST00000533678 PGAP3Q96FM1 320 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 NPY6RQ99463 290 aa17■□□□□ 0.31
RDX-214ENST00000533678 GABRG3Q99928 467 aa17■□□□□ 0.31
RDX-214ENST00000533678 AGPAT1Q99943 283 aa17■□□□□ 0.31
RDX-214ENST00000533678 NUP58Q9BVL2 599 aa17■□□□□ 0.31
RDX-214ENST00000533678 TRIM5Q9C035 493 aa17■□□□□ 0.31
RDX-214ENST00000533678 POLR3BQ9NW08 1133 aaPredicted RBP17■□□□□ 0.31
RDX-214ENST00000533678 ELOVL2Q9NXB9 296 aa17■□□□□ 0.31
RDX-214ENST00000533678 HCN2Q9UL51 889 aa17■□□□□ 0.31
RDX-214ENST00000533678 ANTXRLA6NF34 631 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 M0QYT0 321 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 TBL1XO60907 577 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 MOCS2O96007 188 aaPredicted RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 HOXB2P14652 356 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 PXNP49023 591 aaPredicted RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 CENPCQ03188 943 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 BYSLQ13895 437 aaKnown RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 SLC25A52Q3SY17 297 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 USP39Q53GS9 565 aaKnown RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 EGFLAMQ63HQ2 1017 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 PPP1R2P3Q6NXS1 205 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 RFWD3Q6PCD5 774 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 PRR23BQ6ZRT6 265 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 SND1Q7KZF4 910 aaKnown RBP eCLIP16.99■□□□□ 0.31
RDX-214ENST00000533678 KIAA0907Q7Z7F0 614 aaPredicted RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 AHI1Q8N157 1196 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 GPR161Q8N6U8 529 aaKnown RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 XPO4Q9C0E2 1151 aaKnown RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
RDX-214ENST00000533678 NCDNQ9UBB6 729 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 CLEC4EQ9ULY5 219 aa16.99■□□□□ 0.31
RDX-214ENST00000533678 EP300Q09472 2414 aaPredicted RBP16.98■□□□□ 0.31
RDX-214ENST00000533678 F5H5T6 163 aa16.98■□□□□ 0.31
RDX-214ENST00000533678 TACR2P21452 398 aa16.98■□□□□ 0.31
RDX-214ENST00000533678 NSFP46459 744 aaKnown RBP16.98■□□□□ 0.31
RDX-214ENST00000533678 GSCP56915 257 aaPredicted RBP16.98■□□□□ 0.31
RDX-214ENST00000533678 RNASE9P60153 205 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms