RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	RNF34	Q969K3	372 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	C18orf8	Q96DM3	657 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	PCDHB18P	Q96TA0	734 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	TRIM62	Q9BVG3	475 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CIPC	Q9C0C6	399 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ABCB8	Q9NUT2	735 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ASNSD1	Q9NWL6	643 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	RAB23	Q9ULC3	237 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GVINP1	Q7Z2Y8	2422 aa		11.92	□□□□□ -0.5
CHORDC1-208	ENST00000533062	OTOGL	Q3ZCN5	2332 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CCDC163	A0A0D9SF12	145 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062		A0A1W2PQF6	199 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	DAB1	O75553	588 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	LSM8	O95777	96 aa	Known RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	LATS1	O95835	1130 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	APOE	P02649	317 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	HOXB2	P14652	356 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	HLA-F	P30511	346 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	NTSR1	P30989	418 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CNR2	P34972	360 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GGCX	P38435	758 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GABRB2	P47870	512 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SNX16	P57768	344 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	NOMO3	P69849	1222 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	NNT	Q13423	1086 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	HSF5	Q4G112	596 aa	Predicted RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	OTUD1	Q5VV17	481 aa	Predicted RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	KIAA1211L	Q6NV74	962 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	MMS22L	Q6ZRQ5	1243 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SLC26A9	Q7LBE3	791 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CACNA2D4	Q7Z3S7	1137 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	TRMT11	Q7Z4G4	463 aa	Known RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ANKS1B	Q7Z6G8	1248 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ZNF677	Q86XU0	584 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	LGI2	Q8N0V4	545 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	PGBD3	Q8N328	593 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FAM160A2	Q8N612	972 aa	Predicted RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FRMD1	Q8N878	549 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GAB3	Q8WWW8	586 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	AZIN2	Q96A70	460 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SLC6A17	Q9H1V8	727 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	POLM	Q9NP87	494 aa	Predicted RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SEPT11	Q9NVA2	429 aa	Known RBP	11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ELOVL2	Q9NXB9	296 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	EBF1	Q9UH73	591 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SLC27A6	Q9Y2P4	619 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FAM186A	A6NE01	2351 aa		11.91	□□□□□ -0.5
CHORDC1-208	ENST00000533062		M0QYT0	321 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GJB6	O95452	261 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SERPINC1	P01008	464 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CYP1A1	P04798	512 aa	Predicted RBP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	TACR2	P21452	398 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GBP1	P32455	592 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CD70	P32970	193 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	NOS2	P35228	1153 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FLT3	P36888	993 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	MATK	P42679	507 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	IL12RB1	P42701	662 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ATXN1	P54253	815 aa	Known RBP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CCDC6	Q16204	474 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FILIP1L	Q4L180	1135 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	MS4A13	Q5J8X5	152 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SDE2	Q6IQ49	451 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	TRNP1	Q6NT89	227 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	RASSF3	Q86WH2	238 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CHSY1	Q86X52	802 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CIR1	Q86X95	450 aa	Predicted RBP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	MFN1	Q8IWA4	741 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CARNMT1	Q8N4J0	409 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ZNF397	Q8NF99	534 aa	Predicted RBP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	KCNV2	Q8TDN2	545 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	CYB5D2	Q8WUJ1	264 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	BTN2A3P	Q96KV6	586 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	TBCB	Q99426	244 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	C11orf70	Q9BRQ4	267 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SLC2A11	Q9BYW1	496 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	ANLN	Q9NQW6	1124 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	PIGV	Q9NUD9	493 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	GGA2	Q9UJY4	613 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	STON1	Q9Y6Q2	735 aa		11.9	□□□□□ -0.5
CHORDC1-208	ENST00000533062	DCHS1	Q96JQ0	3298 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062		A0A1B0GTH6	734 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	KCNU1	A8MYU2	1149 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	ALDH1A2	O94788	518 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	HLA-E	P13747	358 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	GABRG2	P18507	467 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	PTMS	P20962	102 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	ABCB4	P21439	1286 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	BCKDHB	P21953	392 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	CCR1	P32246	355 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	SULT1E1	P49888	294 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	ZNF445	P59923	1031 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	SPEM2	Q0P670	501 aa		11.89	□□□□□ -0.51
CHORDC1-208	ENST00000533062	ZNF234	Q14588	700 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms