RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 CHFRQ96EP1 664 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 MMTAG2Q9BU76 263 aaKnown RBP8.84□□□□□ -0.99
CDC27-208ENST00000532575 MSTO1Q9BUK6 570 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 CEP295Q9C0D2 2601 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 CCSER1Q9C0I3 900 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 PRDM14Q9GZV8 571 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 TMEM206Q9H813 350 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 CPSF3Q9UKF6 684 aaKnown RBP8.84□□□□□ -0.99
CDC27-208ENST00000532575 MAGED2Q9UNF1 606 aaPredicted RBP8.84□□□□□ -0.99
CDC27-208ENST00000532575 WASF3Q9UPY6 502 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 PCDHB6Q9Y5E3 794 aa8.84□□□□□ -0.99
CDC27-208ENST00000532575 KPNA7A9QM74 516 aa8.83□□□□□ -1
CDC27-208ENST00000532575 CDX4O14627 284 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 SLC26A4O43511 780 aa8.83□□□□□ -1
CDC27-208ENST00000532575 FAM189A1O60320 539 aa8.83□□□□□ -1
CDC27-208ENST00000532575 ESR1P03372 595 aa8.83□□□□□ -1
CDC27-208ENST00000532575 NMT1P30419 496 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 PNPLA4P41247 253 aa8.83□□□□□ -1
CDC27-208ENST00000532575 TOB1P50616 345 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 SLC12A3P55017 1021 aa8.83□□□□□ -1
CDC27-208ENST00000532575 IRX4P78413 519 aa8.83□□□□□ -1
CDC27-208ENST00000532575 BYSLQ13895 437 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 SV2CQ496J9 727 aa8.83□□□□□ -1
CDC27-208ENST00000532575 WSCD1Q658N2 575 aa8.83□□□□□ -1
CDC27-208ENST00000532575 LMBRD2Q68DH5 695 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 TMPRSS7Q7RTY8 843 aa8.83□□□□□ -1
CDC27-208ENST00000532575 CCDC83Q8IWF9 413 aa8.83□□□□□ -1
CDC27-208ENST00000532575 MYCT1Q8N699 235 aa8.83□□□□□ -1
CDC27-208ENST00000532575 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 TRMT2BQ96GJ1 504 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 ZSCAN31Q96LW9 406 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 ZNF560Q96MR9 790 aa8.83□□□□□ -1
CDC27-208ENST00000532575 SCNM1Q9BWG6 230 aa8.83□□□□□ -1
CDC27-208ENST00000532575 NUSAP1Q9BXS6 441 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 CARS2Q9HA77 564 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 PARVGQ9HBI0 331 aa8.83□□□□□ -1
CDC27-208ENST00000532575 PRDM7Q9NQW5 492 aa8.83□□□□□ -1
CDC27-208ENST00000532575 POLR3BQ9NW08 1133 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 DPP3Q9NY33 737 aa8.83□□□□□ -1
CDC27-208ENST00000532575 EVLQ9UI08 416 aaPredicted RBP8.83□□□□□ -1
CDC27-208ENST00000532575 CITO14578 2027 aa8.83□□□□□ -1
CDC27-208ENST00000532575 PDCD11Q14690 1871 aaKnown RBP8.83□□□□□ -1
CDC27-208ENST00000532575 SRRM3A6NNA2 597 aaPredicted RBP8.82□□□□□ -1
CDC27-208ENST00000532575 H0Y626 953 aa8.82□□□□□ -1
CDC27-208ENST00000532575 K7ENM7 598 aa8.82□□□□□ -1
CDC27-208ENST00000532575 NOL4O94818 638 aa8.82□□□□□ -1
CDC27-208ENST00000532575 TRIM16O95361 564 aa8.82□□□□□ -1
CDC27-208ENST00000532575 NFATC1O95644 943 aa8.82□□□□□ -1
CDC27-208ENST00000532575 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
CDC27-208ENST00000532575 CKMP06732 381 aa8.82□□□□□ -1
CDC27-208ENST00000532575 PFKLP17858 780 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ETFBP38117 255 aa8.82□□□□□ -1
CDC27-208ENST00000532575 DHPSP49366 369 aaPredicted RBP8.82□□□□□ -1
CDC27-208ENST00000532575 MRPS21P82921 87 aaKnown RBP8.82□□□□□ -1
CDC27-208ENST00000532575 MYL7Q01449 175 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ST3GAL1Q11201 340 aa8.82□□□□□ -1
CDC27-208ENST00000532575 AUHQ13825 339 aaKnown RBP8.82□□□□□ -1
CDC27-208ENST00000532575 POSTNQ15063 836 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ZNF77Q15935 545 aa8.82□□□□□ -1
CDC27-208ENST00000532575 IL17AQ16552 155 aa8.82□□□□□ -1
CDC27-208ENST00000532575 CLEC16AQ2KHT3 1053 aa8.82□□□□□ -1
CDC27-208ENST00000532575 UAP1L1Q3KQV9 507 aa8.82□□□□□ -1
CDC27-208ENST00000532575 HSF5Q4G112 596 aaPredicted RBP8.82□□□□□ -1
CDC27-208ENST00000532575 RILPL1Q5EBL4 403 aa8.82□□□□□ -1
CDC27-208ENST00000532575 SPDYCQ5MJ68 293 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ADALQ6DHV7 355 aa8.82□□□□□ -1
CDC27-208ENST00000532575 LRSAM1Q6UWE0 723 aa8.82□□□□□ -1
CDC27-208ENST00000532575 LPCAT2Q7L5N7 544 aa8.82□□□□□ -1
CDC27-208ENST00000532575 RASSF3Q86WH2 238 aa8.82□□□□□ -1
CDC27-208ENST00000532575 CREG2Q8IUH2 290 aa8.82□□□□□ -1
CDC27-208ENST00000532575 KIAA1958Q8N8K9 716 aa8.82□□□□□ -1
CDC27-208ENST00000532575 USP33Q8TEY7 942 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ZCCHC14Q8WYQ9 949 aaKnown RBP8.82□□□□□ -1
CDC27-208ENST00000532575 PIGKQ92643 395 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ACBD6Q9BR61 282 aa8.82□□□□□ -1
CDC27-208ENST00000532575 PI4K2AQ9BTU6 479 aa8.82□□□□□ -1
CDC27-208ENST00000532575 HDAC8Q9BY41 377 aa8.82□□□□□ -1
CDC27-208ENST00000532575 TRPC7Q9HCX4 862 aa8.82□□□□□ -1
CDC27-208ENST00000532575 ADAMTS6Q9UKP5 1117 aa8.82□□□□□ -1
CDC27-208ENST00000532575 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
CDC27-208ENST00000532575 MMP17Q9ULZ9 603 aa8.82□□□□□ -1
CDC27-208ENST00000532575 INVSQ9Y283 1065 aa8.82□□□□□ -1
CDC27-208ENST00000532575 KIF3AQ9Y496 699 aa8.82□□□□□ -1
CDC27-208ENST00000532575 NEUROG3Q9Y4Z2 214 aa8.82□□□□□ -1
CDC27-208ENST00000532575 NUP210Q8TEM1 1887 aaPredicted RBP8.81□□□□□ -1
CDC27-208ENST00000532575 BAHCC1Q9P281 2608 aa8.81□□□□□ -1
CDC27-208ENST00000532575 NPHP3-ACAD11A0A0J9YXS1 232 aa8.81□□□□□ -1
CDC27-208ENST00000532575 MYMKA6NI61 221 aa8.81□□□□□ -1
CDC27-208ENST00000532575 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
CDC27-208ENST00000532575 SHOXO15266 292 aa8.81□□□□□ -1
CDC27-208ENST00000532575 HUS1O60921 280 aa8.81□□□□□ -1
CDC27-208ENST00000532575 IL18RAPO95256 599 aa8.81□□□□□ -1
CDC27-208ENST00000532575 TP53P04637 393 aaPredicted RBP8.81□□□□□ -1
CDC27-208ENST00000532575 HDCP19113 662 aa8.81□□□□□ -1
CDC27-208ENST00000532575 HOXD12P35452 270 aa8.81□□□□□ -1
CDC27-208ENST00000532575 ACOT2P49753 483 aa8.81□□□□□ -1
CDC27-208ENST00000532575 CDR1P51861 262 aa8.81□□□□□ -1
CDC27-208ENST00000532575 ZNF131P52739 623 aa8.81□□□□□ -1
CDC27-208ENST00000532575 ATXN3P54252 364 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms