RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TGS1Q96RS0 853 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 FZD8Q9H461 694 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 PKD2L2Q9NZM6 624 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MPP6Q9NZW5 540 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 A0A0A6YYK5 440 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 EPB42P16452 691 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 CORO1AP31146 461 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 LPIN1Q14693 890 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 TIGD5Q53EQ6 642 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 GLT6D1Q7Z4J2 308 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ST13P5Q8NFI4 369 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 SPATA20Q8TB22 786 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 HTR3CQ8WXA8 447 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 PCED1BQ96HM7 432 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 EXOC2Q96KP1 924 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MAGEB10Q96LZ2 347 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 CNGB3Q9NQW8 809 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 L1RE1Q9UN81 338 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 APOBEC2Q9Y235 224 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 SDR42E2A6NKP2 422 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 SIGLEC16A6NMB1 481 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 HMGB1P1B2RPK0 211 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 GLP2RO95838 553 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MFSD7Q6UXD7 560 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 EML4Q9HC35 981 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 CAPN10Q9HC96 672 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 TLR9Q9NR96 1032 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 PCDHGB4Q9UN71 923 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MYBPHLA2RUH7 354 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 VPS26AO75436 327 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 NFATC1O95644 943 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 DNTTP04053 509 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MAMLD1Q13495 774 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 DDX39BQ13838 428 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 FAM71AQ8IYT1 594 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 C4orf33Q8N1A6 199 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ZSWIM2Q8NEG5 633 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ACBD6Q9BR61 282 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 OXCT2Q9BYC2 517 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 FRMD8P1Q9BZ68 369 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 POLR1EQ9GZS1 481 aaKnown RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 MCOLN1Q9GZU1 580 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 STRCP1A6NGW2 1772 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 KDM3BQ7LBC6 1761 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 FGF18O76093 207 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SPDYE7PQ495Y7 208 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SLC45A4Q5BKX6 768 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 GRAMD4Q6IC98 578 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 USP45Q70EL2 814 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 PPWD1Q96BP3 646 aaKnown RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 ZBED3Q96IU2 234 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 ERP44Q9BS26 406 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TRIM55Q9BYV6 548 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TRABDQ9H4I3 376 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D14Q9P2M4 693 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 DCTN4Q9UJW0 460 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TDRKHQ9Y2W6 561 aaKnown RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 RNF103O00237 685 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 FGF10O15520 208 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CYBAP13498 195 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 LMO2P25791 158 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 ZNF143P52747 638 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 BOP1Q14137 746 aaKnown RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MAP3K21Q5TCX8 1036 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 OR6K2Q8NGY2 324 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 PTPRJQ12913 1337 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 A0A1W2PRU2 124 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SERPINB9P50453 376 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 NETO2Q8NC67 525 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 POF1BQ8WVV4 589 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 LRRC40Q9H9A6 602 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 LNPEPQ9UIQ6 1025 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SIK3Q9Y2K2 1263 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3DA0A087WVF3 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3IA0A087WXS9 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3EA0A087X179 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3KA0A087X1G2 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3FA6NER0 549 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3LB9A6J9 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CILPO75339 1184 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CNMDO75829 334 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MTA2O94776 668 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3HP0C7X1 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 BMP6P22004 513 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 KCNMA1Q12791 1236 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MIIPQ5JXC2 388 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3GQ6DHY5 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 TBC1D3CQ6IPX1 549 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 RFWD3Q6PCD5 774 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms