RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A20PA6NIJ5 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TMEM233B4DJY2 109 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 EBAG9O00559 213 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PEX12O00623 359 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CXCL11O14625 94 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 IFIT3O14879 490 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ANGPT2O15123 496 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 BCAT2O15382 392 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 SPAG6O75602 509 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 DIRAS3O95661 229 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 EIF2S1P05198 315 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ABCB1P08183 1280 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PCNAP12004 261 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PFKLP17858 780 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TAGLN2P37802 199 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 RPL7AP62424 266 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PTSQ03393 145 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 EXOSC9Q06265 439 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 HADHQ16836 314 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 AAK1Q2M2I8 961 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TWISTNBQ3B726 338 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ZNF792Q3KQV3 632 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 GALNTL6Q49A17 601 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TCTE1Q5JU00 501 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 KIAA1841Q6NSI8 718 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 RFX6Q8HWS3 928 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ATAD1Q8NBU5 361 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 OR52M1Q8NGK5 317 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 DHX58Q96C10 678 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FIZ1Q96SL8 496 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 KCNK16Q96T55 309 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 DDX50Q9BQ39 737 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 NACA2Q9H009 215 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 DENND2DQ9H6A0 471 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 UCKL1Q9NWZ5 548 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TIMM13Q9Y5L4 95 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM205AQ6ZU69 1335 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 SMIM30A4D0T7 59 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 NCF1BA6NI72 391 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 SLC9B1P1A6NJY1 282 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 NCF1CA8MVU1 366 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TMCO5BA8MYB1 307 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 FOXO6A8MYZ6 492 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 SNPHO15079 494 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TO15178 435 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 CYTIPO60759 359 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ERLIN1O75477 346 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ONECUT2O95948 504 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 MPOP05164 745 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 FTH1P19P0C7X4 201 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 PRDX5P30044 214 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 BMXP51813 675 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TLE1Q04724 770 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 EFTUD2Q15029 972 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 NRN1LQ496H8 165 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 FBXO48Q5FWF7 155 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 COLEC12Q5KU26 742 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 LIPMQ5VYY2 423 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 CST9LP1Q5W188 147 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 KCNV1Q6PIU1 500 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 LRSAM1Q6UWE0 723 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 OLFML1Q6UWY5 402 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ERN2Q76MJ5 926 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 SPATA24Q86W54 205 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 IL17RCQ8NAC3 791 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 MDM1Q8TC05 714 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 IFI44Q8TCB0 444 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 GANCQ8TET4 914 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 FRAT1Q92837 279 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ZKSCAN4Q969J2 545 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ZDHHC12Q96GR4 267 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 DGAT2Q96PD7 388 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 CACNG6Q9BXT2 260 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 NELFAQ9H3P2 528 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 SEMA4BQ9NPR2 832 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 NFS1Q9Y697 457 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 RRBP1Q9P2E9 1410 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 HMGXB3Q12766 1538 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 H3BM21 787 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TULP2O00295 520 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 GMFGO60234 142 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TULP3O75386 442 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 PTBP3O95758 552 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 DDAH2O95865 285 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 ITGB1P05556 798 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 MMP2P08253 660 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 LTA4HP09960 611 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 GALP22466 123 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 CCR1P32246 355 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 PBX3P40426 434 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 MDH1P40925 334 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 PMP22Q01453 160 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 PLD1Q13393 1074 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 GPM6BQ13491 265 aa5.45□□□□□ -1.54
ECHDC1-222ENST00000531967 TUBB3Q13509 450 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms