RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 UNC45BQ8IWX7 931 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 MINDY1Q8N5J2 469 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.52■□□□□ 0.4
CPSF1-207ENST00000531727 CADM4Q8NFZ8 388 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 DNASE2BQ8WZ79 361 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 GOLGA1Q92805 767 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 GPR174Q9BXC1 333 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 ABCB8Q9NUT2 735 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 GGA2Q9UJY4 613 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 CNTN6Q9UQ52 1028 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 NFE2L3Q9Y4A8 694 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 ACADMP11310 421 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 GNSP15586 552 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 RPL34P49207 117 aaKnown RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 SLC11A2P49281 568 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 TBX4P57082 545 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 PAK1Q13153 545 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 CAMK2GQ13555 558 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 CHST9Q7L1S5 443 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 ADIPOR2Q86V24 386 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 AHI1Q8N157 1196 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 OR2T3Q8NH03 318 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 AZIN2Q96A70 460 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 MIS12Q9H081 205 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 INTS2Q9H0H0 1204 aaKnown RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 TMEM245Q9H330 911 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 DNAAF2Q9NVR5 837 aaKnown RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 PLA2G4CQ9UP65 541 aa17.51■□□□□ 0.39
CPSF1-207ENST00000531727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 TPRP12270 2363 aaKnown RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
CPSF1-207ENST00000531727 EPG5Q9HCE0 2579 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 MEI4A8MW99 385 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 IRAK2O43187 625 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 ACSL4O60488 711 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 PABPC1P11940 636 aaKnown RBP17.5■□□□□ 0.39
CPSF1-207ENST00000531727 HLA-EP13747 358 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 MAOBP27338 520 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 SLC6A4P31645 630 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 FNDC3BQ53EP0 1204 aaKnown RBP17.5■□□□□ 0.39
CPSF1-207ENST00000531727 FAM133BQ5BKY9 247 aaKnown RBP17.5■□□□□ 0.39
CPSF1-207ENST00000531727 PIK3R6Q5UE93 754 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 RFWD3Q6PCD5 774 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 CACUL1Q86Y37 369 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 OR2I1PQ8NGU4 316 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 CYB5D2Q8WUJ1 264 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 NUP58Q9BVL2 599 aa17.5■□□□□ 0.39
CPSF1-207ENST00000531727 SRRTQ9BXP5 876 aaKnown RBP17.5■□□□□ 0.39
CPSF1-207ENST00000531727 CHD8Q9HCK8 2581 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 A0A1B0GTW7 788 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 GOLGA6L7A0A1B0GV03 622 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 TBL1XO60907 577 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 TOP3BO95985 862 aaKnown RBP17.49■□□□□ 0.39
CPSF1-207ENST00000531727 FYNP06241 537 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 KRT5P13647 590 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 SPINK2P20155 84 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 GPD2P43304 727 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 NNTQ13423 1086 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 PTPRNQ16849 979 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 MBLAC2Q68D91 279 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 SCUBE3Q8IX30 993 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 ZNF557Q8N988 423 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-207ENST00000531727 WFDC5Q8TCV5 224 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 FCRL2Q96LA5 508 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-207ENST00000531727 ZDHHC5Q9C0B5 715 aa17.49■□□□□ 0.39
CPSF1-207ENST00000531727 MAP1BP46821 2468 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 GON4LQ3T8J9 2241 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 SPAARA0A1B0GVQ0 90 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 METTL12A8MUP2 240 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 GJB3O75712 270 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 FGFR1OPO95684 399 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 ATP5BP06576 529 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 PROS1P07225 676 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 C7P10643 843 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 CD59P13987 128 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 CD70P32970 193 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 ACADSBP45954 432 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 SLC14A1Q13336 389 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 MEA1Q16626 185 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 DCAF12L1Q5VU92 463 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 NADSYN1Q6IA69 706 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 DENND1BQ6P3S1 775 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 HJURPQ8NCD3 748 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 DQX1Q8TE96 717 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 PRICKLE1Q96MT3 831 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 SERPINB11Q96P15 392 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 DDX50Q9BQ39 737 aaKnown RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 ADAM33Q9BZ11 813 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 PCED1AQ9H1Q7 454 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 LHX5Q9H2C1 402 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 FBRSQ9HAH7 460 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-207ENST00000531727 ST7Q9NRC1 585 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 TLR6Q9Y2C9 796 aa17.48■□□□□ 0.39
CPSF1-207ENST00000531727 MED7O43513 233 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms